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    RpS4 Ribosomal protein S4 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 39484, updated on 9-Dec-2024

    Summary

    Official Symbol
    RpS4provided by FlyBase
    Official Full Name
    Ribosomal protein S4provided by FlyBase
    Primary source
    FLYBASE:FBgn0011284
    Locus tag
    Dmel_CG11276
    See related
    AllianceGenome:FB:FBgn0011284
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    anon-EST:Posey270; CG11276; Dmel\CG11276; Rp S4; rpS4; RPS4; S4e; SX4
    Summary
    A structural constituent of ribosome. Predicted to be involved in translation. Located in cytosolic ribosome. Is expressed in adult head and adult heart. Orthologous to human RPS4X (ribosomal protein S4 X-linked); RPS4Y1 (ribosomal protein S4 Y-linked 1); and RPS4Y2 (ribosomal protein S4 Y-linked 2). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See RpS4 in Genome Data Viewer
    Location:
    69F6-69F6; 3-39 cM
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (13041756..13044234)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (13034856..13037334)

    Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene long non-coding RNA:CR45157 Neighboring gene Serine-arginine repetitive matrix 1 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Syntaxin 13 Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables RNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables structural constituent of ribosome HDA PubMed 
    enables structural constituent of ribosome IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables structural constituent of ribosome IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
     
    enables structural constituent of ribosome TAS
    Traceable Author Statement
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in cytoplasmic translation IC
    Inferred by Curator
    more info
    PubMed 
    involved_in cytoplasmic translation TAS
    Traceable Author Statement
    more info
    PubMed 
    involved_in translation IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in translation IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in cytosolic ribosome HDA PubMed 
    located_in cytosolic ribosome IDA
    Inferred from Direct Assay
    more info
    PubMed 
    part_of cytosolic small ribosomal subunit IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of cytosolic small ribosomal subunit TAS
    Traceable Author Statement
    more info
    PubMed 
    located_in ribosome IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    ribosomal protein S4
    Names
    CG11276-PA
    CG11276-PB
    CG11276-PC
    RpS4-PA
    RpS4-PB
    RpS4-PC

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.4 Reference assembly

      Range
      13041756..13044234
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001300126.1NP_001287055.1  ribosomal protein S4, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001287055.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      A4V1X0, P41042, Q9VU44
      UniProtKB/TrEMBL
      X2JGM9
      Conserved Domains (1) summary
      PLN00036
      Location:1258
      PLN00036; 40S ribosomal protein S4; Provisional
    2. NM_168537.2NP_729871.1  ribosomal protein S4, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_729871.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      A4V1X0, P41042, Q9VU44
      UniProtKB/TrEMBL
      X2JGM9
      Related
      FBpp0075618
      Conserved Domains (1) summary
      PLN00036
      Location:1258
      PLN00036; 40S ribosomal protein S4; Provisional
    3. NM_079329.3NP_524053.2  ribosomal protein S4, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_524053.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      A4V1X0, P41042, Q9VU44
      UniProtKB/TrEMBL
      X2JGM9
      Related
      FBpp0075619
      Conserved Domains (1) summary
      PLN00036
      Location:1258
      PLN00036; 40S ribosomal protein S4; Provisional