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    beat-IIIa beaten path IIIa [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 35035, updated on 9-Dec-2024

    Summary

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    Official Symbol
    beat-IIIaprovided by FlyBase
    Official Full Name
    beaten path IIIaprovided by FlyBase
    Primary source
    FLYBASE:FBgn0265607
    Locus tag
    Dmel_CG12621
    See related
    AllianceGenome:FB:FBgn0265607
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    beat IIIa; Beat-IIIa; CG12621; CG42757; Dmel\CG12621
    Old locus tag
    Dmel_CG42757
    Summary
    Predicted to be involved in heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules and motor neuron axon guidance. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See beat-IIIa in Genome Data Viewer
    Location:
    36C1-36C2; 2-53 cM
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (17131024..17173118)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (17131024..17173118)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR45448 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene pseudo

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Erroneous attribution of relevant transcription factor binding sites despite successful prediction of cis-regulatory modules. Halfon MS, et al. BMC Genomics, 2011 Nov 25. PMID 22115527, Free PMC Article
    2. The Beat generation: a multigene family encoding IgSF proteins related to the Beat axon guidance molecule in Drosophila. Pipes GC, et al. Development, 2001 Nov. PMID 11714679
    3. Deconstruction of the beaten Path-Sidestep interaction network provides insights into neuromuscular system development. Li H, et al. Elife, 2017 Aug 15. PMID 28829740, Free PMC Article
    4. The Drosophila gene disruption project: progress using transposons with distinctive site specificities. Bellen HJ, et al. Genetics, 2011 Jul. PMID 21515576, Free PMC Article
    5. The transcription factors islet and Lim3 combinatorially regulate ion channel gene expression. Wolfram V, et al. J Neurosci, 2014 Feb 12. PMID 24523544, Free PMC Article

    See all (30) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    mobile_element

    • Loc: 17167618-17167803 mobile_element_type = transposon:pogo{}393

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    involved_in motor neuron axon guidance IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    beaten path IIIa
    Names
    CG12621-PD
    CG12621-PE
    beat-IIIa-PD
    beat-IIIa-PE

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      17131024..17173118
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_135985.6 → NP_609829.5  beaten path IIIa, isoform E [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_609829.5

      Status: REVIEWED

      UniProtKB/TrEMBL
      M9MRJ2
      Conserved Domains (2) summary
      smart00410
      Location:88 → 182
      IG_like; Immunoglobulin like
      cl11960
      Location:87 → 183
      Ig; Immunoglobulin domain

    2. NM_001201899.2 → NP_001188828.1  beaten path IIIa, isoform D [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001188828.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      M9MRJ2
      Conserved Domains (2) summary
      smart00410
      Location:88 → 182
      IG_like; Immunoglobulin like
      cl11960
      Location:87 → 183
      Ig; Immunoglobulin domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    M9MRJ2 M9MRJ2
    Q95UI4 Q95UI4

    Gene LinkOut

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