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    CG31156 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 42669, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG31156provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0051156
    Locus tag
    Dmel_CG31156
    See related
    AllianceGenome:FB:FBgn0051156
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG5253; CG5257; Dmel\CG31156
    Summary
    Predicted to enable mRNA binding activity. Predicted to be a structural constituent of ribosome. Predicted to be involved in translation. Is expressed in spermatozoon. Orthologous to human SRBD1 (S1 RNA binding domain 1). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG31156 in Genome Data Viewer
    Location:
    94B6-94B6; 3-75 cM
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (22608670..22613656, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (18434392..18439378, complement)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene buttonless Neighboring gene Exchange factor for Arf 6 Neighboring gene uncharacterized protein Neighboring gene mitochondrial ribosome recycling factor 2 Neighboring gene uncharacterized protein Neighboring gene mitochondrial ribosomal protein L45

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The Exon Junction Complex and intron removal prevent re-splicing of mRNA. Joseph B, et al. PLoS Genet, 2021 May. PMID 34033644, Free PMC Article
    2. A map of directional genetic interactions in a metazoan cell. Fischer B, et al. Elife, 2015 Mar 6. PMID 25748138, Free PMC Article
    3. Cross-species analysis of viral nucleic acid interacting proteins identifies TAOKs as innate immune regulators. Pennemann FL, et al. Nat Commun, 2021 Dec 1. PMID 34853303, Free PMC Article
    4. Mobile-phone radiation-induced perturbation of gene-expression profiling, redox equilibrium and sporadic-apoptosis control in the ovary of Drosophila melanogaster. Manta AK, et al. Fly (Austin), 2017 Apr 3. PMID 27960592, Free PMC Article
    5. A genetic interaction map of cell cycle regulators. Billmann M, et al. Mol Biol Cell, 2016 Apr 15. PMID 26912791, Free PMC Article

    See all (29) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables mRNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables nucleic acid binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables structural constituent of ribosome IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in nucleobase-containing compound metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in translation IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG31156-PA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      22608670..22613656 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_142813.6 → NP_651070.3  uncharacterized protein Dmel_CG31156 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_651070.3

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q95RT4, Q9VCX7
      Conserved Domains (5) summary
      COG2183
      Location:184 → 931
      Tex; Transcriptional accessory protein Tex/SPT6 [Transcription]
      pfam09371
      Location:190 → 362
      Tex_N; Tex-like protein N-terminal domain
      pfam12836
      Location:697 → 758
      HHH_3; Helix-hairpin-helix motif
      pfam16921
      Location:527 → 653
      Tex_YqgF; Tex protein YqgF-like domain
      cl09927
      Location:870 → 930
      S1_like; S1_like: Ribosomal protein S1-like RNA-binding domain. Found in a wide variety of RNA-associated proteins. Originally identified in S1 ribosomal protein. This superfamily also contains the Cold Shock Domain (CSD), which is a homolog of the S1 domain. ...
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9VCX7 Q9VCX7

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