U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Smug Single-strand-selective monofunctional uracil-DNA glycosylase [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 42078, updated on 9-Dec-2024

    Summary

    Official Symbol
    Smugprovided by FlyBase
    Official Full Name
    Single-strand-selective monofunctional uracil-DNA glycosylaseprovided by FlyBase
    Primary source
    FLYBASE:FBgn0038490
    Locus tag
    Dmel_CG5285
    See related
    AllianceGenome:FB:FBgn0038490
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG5285; CG5285_Dm_7300236; Dmel\CG5285; dmSMUG1; SMUG; SMUG1; ssUDG
    Summary
    Predicted to enable oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity and uracil DNA N-glycosylase activity. Predicted to be involved in base-excision repair. Orthologous to human SMUG1 (single-strand-selective monofunctional uracil-DNA glycosylase 1). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Smug in Genome Data Viewer
    Location:
    89F1-89F1; 3-60 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (17150587..17151630)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (12976309..12977352)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene mann-cup Neighboring gene uncharacterized protein Neighboring gene Deterin Neighboring gene Mucin related 89F Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables single-strand selective uracil DNA N-glycosylase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables uracil DNA N-glycosylase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables uracil DNA N-glycosylase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    Process Evidence Code Pubs
    involved_in base-excision repair IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in base-excision repair ISS
    Inferred from Sequence or Structural Similarity
    more info
     

    General protein information

    Preferred Names
    Single-strand-selective monofunctional uracil-DNA glycosylase
    Names
    CG5285-PA
    Smug-PA
    single-strand-specific UDG
    single-strand-specific monofunctional uracil-DNA glycosylase 1
    uracil-DNA glycosylase
    NP_650609.1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      17150587..17151630
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_142352.2NP_650609.1  Single-strand-selective monofunctional uracil-DNA glycosylase [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_650609.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q29QQ6, Q9VEM1
      Related
      FBpp0082850
      Conserved Domains (1) summary
      cl00483
      Location:39270
      UDG_like; Uracil-DNA glycosylases (UDG) and related enzymes