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    CG11504 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 43557, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG11504provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0039733
    Locus tag
    Dmel_CG11504
    See related
    AllianceGenome:FB:FBgn0039733
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG11504
    Summary
    Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be part of transcription regulator complex. Predicted to be active in nucleus. Is expressed in several structures, including central brain primordium; cuboidal/columnar epithelium; embryonic central brain neurons; ganglia; and larval nervous system. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG11504 in Genome Data Viewer
    Location:
    99D1-99D1; 3-100 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (29997900..29999755)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (25823622..25825477)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Spindle assembly abnormal 6 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene tace

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Deubiquitylating enzyme UBP64 controls cell fate through stabilization of the transcriptional repressor tramtrack. Bajpe PK, et al. Mol Cell Biol, 2008 Mar. PMID 18160715, Free PMC Article
    2. Widespread evidence of cooperative DNA binding by transcription factors in Drosophila development. Kazemian M, et al. Nucleic Acids Res, 2013 Sep. PMID 23847101, Free PMC Article
    3. Genome-Wide Association Analyses Point to Candidate Genes for Electric Shock Avoidance in Drosophila melanogaster. Appel M, et al. PLoS One, 2015. PMID 25992709, Free PMC Article
    4. Enhancer modeling uncovers transcriptional signatures of individual cardiac cell states in Drosophila. Busser BW, et al. Nucleic Acids Res, 2015 Feb 18. PMID 25609699, Free PMC Article
    5. Genetic annotation of gain-of-function screens using RNA interference and in situ hybridization of candidate genes in the Drosophila wing. Molnar C, et al. Genetics, 2012 Oct. PMID 22798488, Free PMC Article

    See all (27) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    part_of transcription regulator complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG11504-PA
    CG11504-PB
    CG11504-PC

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      29997900..29999755
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_143501.4 → NP_651758.1  uncharacterized protein Dmel_CG11504, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_651758.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q7K4R2
      Related
      FBpp0084913
      Conserved Domains (2) summary
      pfam09786
      Location:238 → 409
      CytochromB561_N; Cytochrome B561, N terminal
      pfam10545
      Location:11 → 92
      MADF_DNA_bdg; Alcohol dehydrogenase transcription factor Myb/SANT-like

    2. NM_170454.3 → NP_733333.1  uncharacterized protein Dmel_CG11504, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_733333.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q7K4R2
      Related
      FBpp0084914
      Conserved Domains (2) summary
      pfam09786
      Location:238 → 409
      CytochromB561_N; Cytochrome B561, N terminal
      pfam10545
      Location:11 → 92
      MADF_DNA_bdg; Alcohol dehydrogenase transcription factor Myb/SANT-like

    3. NM_176584.2 → NP_788761.1  uncharacterized protein Dmel_CG11504, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_788761.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q7K4R2
      Related
      FBpp0084915
      Conserved Domains (2) summary
      pfam09786
      Location:238 → 409
      CytochromB561_N; Cytochrome B561, N terminal
      pfam10545
      Location:11 → 92
      MADF_DNA_bdg; Alcohol dehydrogenase transcription factor Myb/SANT-like
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q7K4R2 Q7K4R2

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