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    CG15747 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 32288, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG15747provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0030474
    Locus tag
    Dmel_CG15747
    See related
    AllianceGenome:FB:FBgn0030474
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG15747
    Summary
    Predicted to be involved in mRNA splicing, via spliceosome. Part of catalytic step 2 spliceosome and precatalytic spliceosome. Is expressed in organism. Orthologous to human NSRP1 (nuclear speckle splicing regulatory protein 1). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG15747 in Genome Data Viewer
    Location:
    11E12-11E13; 1-42 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (13338318..13341009)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (13232351..13235042)

    Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR32636 Neighboring gene Ribosomal protein S15Aa Neighboring gene long non-coding RNA:CR45708 Neighboring gene long non-coding RNA:CR45709

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Cardiomyopathy is associated with ribosomal protein gene haplo-insufficiency in Drosophila melanogaster. Casad ME, et al. Genetics, 2011 Nov. PMID 21890737, Free PMC Article
    2. Dynamics of Dark-Fly Genome Under Environmental Selections. Izutsu M, et al. G3 (Bethesda), 2015 Dec 4. PMID 26637434, Free PMC Article
    3. Conservation of the protein composition and electron microscopy structure of Drosophila melanogaster and human spliceosomal complexes. Herold N, et al. Mol Cell Biol, 2009 Jan. PMID 18981222, Free PMC Article
    4. spenito is required for sex determination in Drosophila melanogaster. Yan D, et al. Proc Natl Acad Sci U S A, 2015 Sep 15. PMID 26324914, Free PMC Article
    5. A genetic interaction map of cell cycle regulators. Billmann M, et al. Mol Biol Cell, 2016 Apr 15. PMID 26912791, Free PMC Article

    See all (23) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Process Evidence Code Pubs
    involved_in mRNA splicing, via spliceosome IC
    Inferred by Curator
    more info
    		 PubMed 
    involved_in regulation of alternative mRNA splicing, via spliceosome IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    part_of catalytic step 2 spliceosome HDA PubMed 
    part_of precatalytic spliceosome HDA PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG15747-PA
    CG15747-PC

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004354.4 Reference assembly

      Range
      13338318..13341009
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_167364.2 → NP_727694.1  uncharacterized protein Dmel_CG15747, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_727694.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q95S36, Q9VYE3
      Related
      FBpp0073597
      Conserved Domains (1) summary
      pfam09745
      Location:63 → 181
      DUF2040; Coiled-coil domain-containing protein 55 (DUF2040)

    2. NM_001298276.1 → NP_001285205.1  uncharacterized protein Dmel_CG15747, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001285205.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q95S36, Q9VYE3
      Conserved Domains (1) summary
      pfam09745
      Location:63 → 181
      DUF2040; Coiled-coil domain-containing protein 55 (DUF2040)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8MYY9 Q8MYY9
    Q9VYE3 Q9VYE3

    Gene LinkOut

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