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    NimA Nimrod A [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 318930, updated on 9-Dec-2024

    Summary

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    Official Symbol
    NimAprovided by FlyBase
    Official Full Name
    Nimrod Aprovided by FlyBase
    Primary source
    FLYBASE:FBgn0261514
    Locus tag
    Dmel_CG42282
    See related
    AllianceGenome:FB:FBgn0261514
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    BG:DS00180.5; CG31765; CG31841; CG42282; CG8855; CT25428; Dmel\CG42282; DS00180.5; j; nimA
    Old locus tag
    Dmel_CG31765; Dmel_CG31841
    Summary
    Predicted to be involved in phagocytosis. Predicted to be active in membrane. Orthologous to human DLK1 (delta like non-canonical Notch ligand 1). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See NimA in Genome Data Viewer
    Location:
    34E5-34E5; 2-50 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (13957539..13963381)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (13957539..13963381)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene Ance-3 Neighboring gene Vajk2 Neighboring gene Vajk3 Neighboring gene Nimrod B1 Neighboring gene Nimrod B2 Neighboring gene Nimrod B3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Drosophila genomic sequence annotation using the BLOCKS+ database. Henikoff JG, et al. Genome Res, 2000 Apr. PMID 10779495, Free PMC Article
    2. Evolution of genes and repeats in the Nimrod superfamily. Somogyi K, et al. Mol Biol Evol, 2008 Nov. PMID 18703524
    3. Genetic Data on Drosophila Affinis, with a Discussion of the Relationships in the Subgenus Sophophora. Sturtevant AH. Genetics, 1940 Jul. PMID 17246974, Free PMC Article
    4. Functional conservation of the active sites of human and Drosophila angiotensin I-converting enzyme. Coates D, et al. Biochemistry, 2000 Aug 1. PMID 10913309
    5. [Analysis of spontaneous and ethylmethanesulfonate-induced visible mutations in the genetically unstable MS, w strain of Drosophila melanogaster]. Romanova NI, et al. Genetika, 1996 Jun. PMID 8964464

    See all (45) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in phagocytosis ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Component Evidence Code Pubs
    is_active_in membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in membrane ISM
    Inferred from Sequence Model
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    nimrod A
    Names
    CG42282-PD
    CG42282-PE
    CG42282-PF
    NimA-PD
    NimA-PE
    NimA-PF
    jaunty

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      13957539..13963381
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001259097.1 → NP_001246026.1  nimrod A, isoform D [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001246026.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      D0IQL4
      Conserved Domains (1) summary
      pfam07546
      Location:52 → 116
      EMI; EMI domain

    2. NM_135847.6 → NP_609691.6  nimrod A, isoform E [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_609691.6

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8IP58
      Conserved Domains (2) summary
      pfam07546
      Location:52 → 116
      EMI; EMI domain
      pfam07974
      Location:170 → 200
      EGF_2; EGF-like domain

    3. NM_001298989.1 → NP_001285918.1  nimrod A, isoform F [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001285918.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8IP58
      Conserved Domains (2) summary
      pfam07546
      Location:52 → 116
      EMI; EMI domain
      pfam07974
      Location:170 → 200
      EGF_2; EGF-like domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    D0IQL4 D0IQL4
    Q8IP58 Q8IP58

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