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    2610528J11Rik RIKEN cDNA 2610528J11 gene [ Mus musculus (house mouse) ]

    Gene ID: 66451, updated on 27-Nov-2024

    Summary

    Official Symbol
    2610528J11Rikprovided by MGI
    Official Full Name
    RIKEN cDNA 2610528J11 geneprovided by MGI
    Primary source
    MGI:MGI:1913701
    See related
    Ensembl:ENSMUSG00000028536 AllianceGenome:MGI:1913701
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    TEMP
    Summary
    Predicted to be located in early endosome; plasma membrane; and recycling endosome. Is expressed in brain. Orthologous to human C1orf210 (chromosome 1 open reading frame 210). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Biased expression in kidney adult (RPKM 46.1), duodenum adult (RPKM 42.4) and 13 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See 2610528J11Rik in Genome Data Viewer
    Location:
    4 D2.1; 4 54.78 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (118384207..118387422)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (118526962..118530217)

    Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene predicted gene 12859 Neighboring gene ribosomal protein S5 pseudogene Neighboring gene transmembrane protein 125 Neighboring gene predicted gene, 40237

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    located_in early endosome IEA
    Inferred from Electronic Annotation
    more info
     
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in recycling endosome IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    type III endosome membrane protein TEMP

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001419078.1NP_001406007.1  type III endosome membrane protein TEMP

      Status: VALIDATED

      Source sequence(s)
      BX842610
      UniProtKB/Swiss-Prot
      Q9CQM1
      Related
      ENSMUSP00000101975.2, ENSMUST00000106367.8
    2. NM_025572.3NP_079848.1  type III endosome membrane protein TEMP

      See identical proteins and their annotated locations for NP_079848.1

      Status: VALIDATED

      Source sequence(s)
      BX842610
      Consensus CDS
      CCDS18554.1
      UniProtKB/Swiss-Prot
      Q9CQM1
      Related
      ENSMUSP00000030261.6, ENSMUST00000030261.6
      Conserved Domains (1) summary
      pfam15176
      Location:1595
      LRR19-TM; Leucine-rich repeat family 19 TM domain

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000070.7 Reference GRCm39 C57BL/6J

      Range
      118384207..118387422
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)