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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_011582.1 RefSeqGene
- Range
-
5001..124293
- Download
- GenBank, FASTA, Sequence Viewer (Graphics), LRG_29
mRNA and Protein(s)
-
NM_000065.5 → NP_000056.2 complement component C6 precursor
See identical proteins and their annotated locations for NP_000056.2
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) represents the predominant transcript. Variants 1 and 2 both encode the same protein.
- Source sequence(s)
-
AC008863, DA642358, J05064
- Consensus CDS
-
CCDS3936.1
- UniProtKB/Swiss-Prot
-
P13671
- UniProtKB/TrEMBL
-
A8K8Z4
- Related
- ENSP00000338861.5, ENST00000337836.10
- Conserved Domains (7) summary
-
- cd00033
Location:644 → 700
- CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
- smart00032
Location:704 → 755
- CCP; Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR)
- smart00057
Location:862 → 934
- FIMAC; factor I membrane attack complex
- smart00209
Location:568 → 623
- TSP1; Thrombospondin type 1 repeats
- smart00457
Location:313 → 514
- MACPF; membrane-attack complex / perforin
- cd00112
Location:142 → 173
- LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
- pfam00090
Location:85 → 127
- TSP_1; Thrombospondin type 1 domain
-
NM_001115131.4 → NP_001108603.2 complement component C6 precursor
See identical proteins and their annotated locations for NP_001108603.2
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. Variants 1 and 2 both encode the same protein.
- Source sequence(s)
-
AC008863, AC091871, BC035723, BJ993387, J05064
- Consensus CDS
-
CCDS3936.1
- UniProtKB/Swiss-Prot
-
P13671
- UniProtKB/TrEMBL
-
A8K8Z4
- Related
- ENSP00000263413.3, ENST00000263413.7
- Conserved Domains (7) summary
-
- cd00033
Location:644 → 700
- CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
- smart00032
Location:704 → 755
- CCP; Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR)
- smart00057
Location:862 → 934
- FIMAC; factor I membrane attack complex
- smart00209
Location:568 → 623
- TSP1; Thrombospondin type 1 repeats
- smart00457
Location:313 → 514
- MACPF; membrane-attack complex / perforin
- cd00112
Location:142 → 173
- LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
- pfam00090
Location:85 → 127
- TSP_1; Thrombospondin type 1 domain
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000005.10 Reference GRCh38.p14 Primary Assembly
- Range
-
41142116..41261469 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_047417689.1 → XP_047273645.1 complement component C6 isoform X5
- UniProtKB/TrEMBL
-
A8K8Z4
-
XM_011514119.4 → XP_011512421.1 complement component C6 isoform X4
- UniProtKB/TrEMBL
-
A8K8Z4
- Conserved Domains (7) summary
-
- cd00033
Location:653 → 709
- CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
- smart00032
Location:713 → 764
- CCP; Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR)
- smart00057
Location:880 → 952
- FIMAC; factor I membrane attack complex
- smart00209
Location:577 → 632
- TSP1; Thrombospondin type 1 repeats
- smart00457
Location:322 → 523
- MACPF; membrane-attack complex / perforin
- cd00112
Location:151 → 182
- LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
- pfam00090
Location:94 → 142
- TSP_1; Thrombospondin type 1 domain
-
XM_006714496.5 → XP_006714559.1 complement component C6 isoform X3
- UniProtKB/TrEMBL
-
A8K8Z4
- Conserved Domains (7) summary
-
- cd00033
Location:672 → 728
- CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
- smart00032
Location:732 → 783
- CCP; Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR)
- smart00057
Location:890 → 962
- FIMAC; factor I membrane attack complex
- smart00209
Location:596 → 651
- TSP1; Thrombospondin type 1 repeats
- smart00457
Location:322 → 523
- MACPF; membrane-attack complex / perforin
- cd00112
Location:151 → 182
- LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
- cl15278
Location:94 → 136
- TSP_1; Thrombospondin type 1 domain
-
XM_011514114.4 → XP_011512416.1 complement component C6 isoform X1
- UniProtKB/TrEMBL
-
A8K8Z4
- Conserved Domains (7) summary
-
- cd00033
Location:672 → 728
- CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
- smart00032
Location:732 → 783
- CCP; Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR)
- smart00057
Location:899 → 971
- FIMAC; factor I membrane attack complex
- smart00209
Location:596 → 651
- TSP1; Thrombospondin type 1 repeats
- smart00457
Location:322 → 523
- MACPF; membrane-attack complex / perforin
- cd00112
Location:151 → 182
- LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
- cl15278
Location:94 → 136
- TSP_1; Thrombospondin type 1 domain
-
XM_011514115.4 → XP_011512417.1 complement component C6 isoform X2
See identical proteins and their annotated locations for XP_011512417.1
- UniProtKB/TrEMBL
-
A8K8Z4
- Conserved Domains (7) summary
-
- cd00033
Location:663 → 719
- CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
- PHA02831
Location:663 → 785
- PHA02831; EEV host range protein; Provisional
- smart00057
Location:890 → 962
- FIMAC; factor I membrane attack complex
- smart00209
Location:587 → 642
- TSP1; Thrombospondin type 1 repeats
- smart00457
Location:313 → 514
- MACPF; membrane-attack complex / perforin
- cd00112
Location:142 → 173
- LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
- pfam00090
Location:85 → 133
- TSP_1; Thrombospondin type 1 domain
-
XM_011514116.4 → XP_011512418.1 complement component C6 isoform X2
See identical proteins and their annotated locations for XP_011512418.1
- UniProtKB/TrEMBL
-
A8K8Z4
- Conserved Domains (7) summary
-
- cd00033
Location:663 → 719
- CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
- PHA02831
Location:663 → 785
- PHA02831; EEV host range protein; Provisional
- smart00057
Location:890 → 962
- FIMAC; factor I membrane attack complex
- smart00209
Location:587 → 642
- TSP1; Thrombospondin type 1 repeats
- smart00457
Location:313 → 514
- MACPF; membrane-attack complex / perforin
- cd00112
Location:142 → 173
- LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
- pfam00090
Location:85 → 133
- TSP_1; Thrombospondin type 1 domain
-
XM_047417687.1 → XP_047273643.1 complement component C6 isoform X2
- UniProtKB/TrEMBL
-
A8K8Z4
-
XM_011514117.4 → XP_011512419.1 complement component C6 isoform X2
See identical proteins and their annotated locations for XP_011512419.1
- UniProtKB/TrEMBL
-
A8K8Z4
- Conserved Domains (7) summary
-
- cd00033
Location:663 → 719
- CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
- PHA02831
Location:663 → 785
- PHA02831; EEV host range protein; Provisional
- smart00057
Location:890 → 962
- FIMAC; factor I membrane attack complex
- smart00209
Location:587 → 642
- TSP1; Thrombospondin type 1 repeats
- smart00457
Location:313 → 514
- MACPF; membrane-attack complex / perforin
- cd00112
Location:142 → 173
- LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
- pfam00090
Location:85 → 133
- TSP_1; Thrombospondin type 1 domain
-
XM_017009818.3 → XP_016865307.1 complement component C6 isoform X2
- UniProtKB/TrEMBL
-
A8K8Z4
- Conserved Domains (7) summary
-
- cd00033
Location:663 → 719
- CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
- PHA02831
Location:663 → 785
- PHA02831; EEV host range protein; Provisional
- smart00057
Location:890 → 962
- FIMAC; factor I membrane attack complex
- smart00209
Location:587 → 642
- TSP1; Thrombospondin type 1 repeats
- smart00457
Location:313 → 514
- MACPF; membrane-attack complex / perforin
- cd00112
Location:142 → 173
- LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
- pfam00090
Location:85 → 133
- TSP_1; Thrombospondin type 1 domain
-
XM_011514118.4 → XP_011512420.1 complement component C6 isoform X2
See identical proteins and their annotated locations for XP_011512420.1
- UniProtKB/TrEMBL
-
A8K8Z4
- Conserved Domains (7) summary
-
- cd00033
Location:663 → 719
- CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
- PHA02831
Location:663 → 785
- PHA02831; EEV host range protein; Provisional
- smart00057
Location:890 → 962
- FIMAC; factor I membrane attack complex
- smart00209
Location:587 → 642
- TSP1; Thrombospondin type 1 repeats
- smart00457
Location:313 → 514
- MACPF; membrane-attack complex / perforin
- cd00112
Location:142 → 173
- LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
- pfam00090
Location:85 → 133
- TSP_1; Thrombospondin type 1 domain
-
XM_047417688.1 → XP_047273644.1 complement component C6 isoform X2
- UniProtKB/TrEMBL
-
A8K8Z4
Alternate T2T-CHM13v2.0
Genomic
-
NC_060929.1 Alternate T2T-CHM13v2.0
- Range
-
41398594..41517945 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054353424.1 → XP_054209399.1 complement component C6 isoform X5
- UniProtKB/TrEMBL
-
A8K8Z4
-
XM_054353423.1 → XP_054209398.1 complement component C6 isoform X4
- UniProtKB/TrEMBL
-
A8K8Z4
-
XM_054353417.1 → XP_054209392.1 complement component C6 isoform X3
- UniProtKB/TrEMBL
-
A8K8Z4
-
XM_054353415.1 → XP_054209390.1 complement component C6 isoform X1
- UniProtKB/TrEMBL
-
A8K8Z4
-
XM_054353416.1 → XP_054209391.1 complement component C6 isoform X2
- UniProtKB/TrEMBL
-
A8K8Z4
-
XM_054353421.1 → XP_054209396.1 complement component C6 isoform X2
- UniProtKB/TrEMBL
-
A8K8Z4
-
XM_054353420.1 → XP_054209395.1 complement component C6 isoform X2
- UniProtKB/TrEMBL
-
A8K8Z4
-
XM_054353419.1 → XP_054209394.1 complement component C6 isoform X2
- UniProtKB/TrEMBL
-
A8K8Z4
-
XM_054353418.1 → XP_054209393.1 complement component C6 isoform X2
- UniProtKB/TrEMBL
-
A8K8Z4
-
XM_054353422.1 → XP_054209397.1 complement component C6 isoform X2
- UniProtKB/TrEMBL
-
A8K8Z4