U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    EXS (ERD1/XPR1/SYG1) family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 843280, updated on 18-Sep-2024

    Summary

    Go to the top of the page Help
    Official Full Name
    EXS (ERD1/XPR1/SYG1) family protein
    Primary source
    TAIR:AT1G69480
    Locus tag
    AT1G69480
    See related
    Araport:AT1G69480
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F10D13.13; F10D13_13
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Location:
    chromosome: 1
    Exon count:
    13
    Sequence:
    Chromosome: 1; NC_003070.9 (26113990..26117955, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene emp24/gp25L/p24 family/GOLD family protein Neighboring gene heat shock protein-binding protein Neighboring gene Ribosomal L32p protein family Neighboring gene NAC-like, activated by AP3/PI

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help
    NM_105615.4

    Gene Ontology Provided by TAIR

    Component Evidence Code Pubs
    located_in plasma membrane ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    EXS (ERD1/XPR1/SYG1) family protein
    NP_177107.2
    • EXS (ERD1/XPR1/SYG1) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane, plasma membrane; EXPRESSED IN: stem, sepal, stamen, seed; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: EXS, C-terminal (InterPro:IPR004342), SPX, N-terminal (InterPro:IPR004331); BEST Arabidopsis thaliana protein match is: EXS (ERD1/XPR1/SYG1) family protein (TAIR:AT1G14040.1); Has 1143 Blast hits to 1074 proteins in 207 species: Archae - 0; Bacteria - 12; Metazoa - 268; Fungi - 392; Plants - 315; Viruses - 0; Other Eukaryotes - 156 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      26113990..26117955 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001334410.1 → NP_001320450.1  EXS (ERD1/XPR1/SYG1) family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q6R8G0, Q9C789
      UniProtKB/TrEMBL
      A0A5S9WTP0

    2. NM_105615.4 → NP_177107.2  EXS (ERD1/XPR1/SYG1) family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q6R8G0, Q9C789
      UniProtKB/TrEMBL
      A0A5S9WTP0
      Conserved Domains (3) summary
      cd14476
      Location:2 → 318
      SPX_PHO1_like; SPX domain of the plant protein PHOSPHATE1 (PHO1)
      pfam03105
      Location:3 → 322
      SPX; SPX domain
      pfam03124
      Location:415 → 749
      EXS; EXS family
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q6R8G0.1

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials
    Tools