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    prfB peptide chain release factor 1 [ Pseudomonas aeruginosa PAO1 ]

    Gene ID: 880384, updated on 24-Aug-2024

    Summary

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    Gene symbol
    prfB
    Gene description
    peptide chain release factor 1
    Locus tag
    PA3701
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Pseudomonas aeruginosa PAO1 (strain: PAO1)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
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    Genomic context

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    Sequence:
    NC_002516.2 (4142570..4143665, complement)

    NC_002516.2Genomic Context describing neighboring genes Neighboring gene transcriptional regulator Neighboring gene lysine--tRNA ligase Neighboring gene two-component response regulator Neighboring gene chemotaxis-specific methylesterase Neighboring gene chemotaxis sensor/effector fusion protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_002516.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Pseudomonas Genome Database: facilitating user-friendly, comprehensive comparisons of microbial genomes. Winsor GL, et al. Nucleic Acids Res, 2009 Jan. PMID 18978025, Free PMC Article
    2. Defining the Pseudomonas aeruginosa SOS response and its role in the global response to the antibiotic ciprofloxacin. Cirz RT, et al. J Bacteriol, 2006 Oct. PMID 17015649, Free PMC Article
    3. Cystic fibrosis sputum supports growth and cues key aspects of Pseudomonas aeruginosa physiology. Palmer KL, et al. J Bacteriol, 2005 Aug. PMID 16030221, Free PMC Article
    4. A cystic fibrosis epidemic strain of Pseudomonas aeruginosa displays enhanced virulence and antimicrobial resistance. Salunkhe P, et al. J Bacteriol, 2005 Jul. PMID 15995206, Free PMC Article
    5. Effect of anaerobiosis and nitrate on gene expression in Pseudomonas aeruginosa. Filiatrault MJ, et al. Infect Immun, 2005 Jun. PMID 15908409, Free PMC Article

    See all (10) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    • peptide chain release factor 2; product name confidence: class 2 (high similarity to functionally studied protein); This gene contains a frameshift that has been confirmed in the final assembly. Contains a high homolgy to Escherichia coli prfB which also has an in-frame UGA termination codon located in sequence and is a naturally occurring. +1 frameshift (ribosomal slippage) is required for synthesis of RF-2.'

    General protein information

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    Preferred Names
    peptide chain release factor 1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_002516.2 Reference assembly

      Range
      4142570..4143665 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. YP_003933612.1 peptide chain release factor 1 [Pseudomonas aeruginosa PAO1]

      See identical proteins and their annotated locations for YP_003933612.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A0H2ZF15
      Conserved Domains (1) summary
      PRK00578
      Location:2 → 364
      prfB; peptide chain release factor 2; Validated
    Nucleotide Protein
    Heading Accession and Version

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