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    PA3866 pyocin protein [ Pseudomonas aeruginosa PAO1 ]

    Gene ID: 879794, updated on 24-Aug-2024

    Summary

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    Gene symbol
    PA3866
    Gene description
    pyocin protein
    Locus tag
    PA3866
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Pseudomonas aeruginosa PAO1 (strain: PAO1)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
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    Genomic context

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    Sequence:
    NC_002516.2 (4327697..4329991, complement)

    NC_002516.2Genomic Context describing neighboring genes Neighboring gene amino acid binding protein Neighboring gene hypothetical protein Neighboring gene DNA invertase Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_002516.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Structure and Analysis of R1 and R2 Pyocin Receptor-Binding Fibers. Buth SA, et al. Viruses, 2018 Aug 14. PMID 30110933, Free PMC Article
    2. Molecular characterization of pyocin S3, a novel S-type pyocin from Pseudomonas aeruginosa. Duport C, et al. J Biol Chem, 1995 Apr 14. PMID 7721800
    3. SOS-Independent Pyocin Production in P. aeruginosa Is Induced by XerC Recombinase Deficiency. Baggett NS, et al. mBio, 2021 Dec 21. PMID 34809462, Free PMC Article
    4. Pseudomonas Genome Database: facilitating user-friendly, comprehensive comparisons of microbial genomes. Winsor GL, et al. Nucleic Acids Res, 2009 Jan. PMID 18978025, Free PMC Article
    5. Defining the Pseudomonas aeruginosa SOS response and its role in the global response to the antibiotic ciprofloxacin. Cirz RT, et al. J Bacteriol, 2006 Oct. PMID 17015649, Free PMC Article

    See all (13) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. SOS-Independent Pyocin Production in P. aeruginosa Is Induced by XerC Recombinase Deficiency.
      Title: SOS-Independent Pyocin Production in P. aeruginosa Is Induced by XerC Recombinase Deficiency.
    2. Structure and analysis of R1 and R2 pyocin receptor-binding fibers has been presented.
      Title: Structure and Analysis of R1 and R2 Pyocin Receptor-Binding Fibers.
    Submit: New GeneRIF Correction

    General gene information

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    Homology

    Gene Ontology Provided by PseudoCAP

    Process Evidence Code Pubs
    acts_upstream_of_or_within cytolysis IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    pyocin protein
    NP_252555.1
    • Product name confidence: class 2 (High similarity to functionally studied protein)

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_002516.2 Reference assembly

      Range
      4327697..4329991 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_252555.1 pyocin protein [Pseudomonas aeruginosa PAO1]

      See identical proteins and their annotated locations for NP_252555.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A5E5R8J5
      Conserved Domains (3) summary
      pfam06958
      Location:519 → 663
      Pyocin_S; S-type Pyocin
      pfam12106
      Location:669 → 758
      Colicin_E5; Colicin E5 ribonuclease domain
      cl28295
      Location:148 → 322
      PKS_KS; Beta-ketoacyl synthase
    Nucleotide Protein
    Heading Accession and Version

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