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    Mir22hg Mir22 host gene (non-protein coding) [ Mus musculus (house mouse) ]

    Gene ID: 100042498, updated on 2-Nov-2024

    Summary

    Official Symbol
    Mir22hgprovided by MGI
    Official Full Name
    Mir22 host gene (non-protein coding)provided by MGI
    Primary source
    MGI:MGI:1914348
    See related
    Ensembl:ENSMUSG00000085148 AllianceGenome:MGI:1914348
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    mir-22; 2210403K04Rik
    Summary
    Acts upstream of or within response to wounding. Orthologous to human MIR22HG (MIR22 host gene). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Ubiquitous expression in bladder adult (RPKM 25.8), placenta adult (RPKM 10.6) and 28 other tissues See more
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    Genomic context

    See Mir22hg in Genome Data Viewer
    Location:
    11 B5; 11 45.91 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (75352365..75357516)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (75461539..75466690)

    Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene serine (or cysteine) peptidase inhibitor, clade F, member 2 Neighboring gene predicted gene, 35391 Neighboring gene WD repeat domain 81 Neighboring gene STARR-positive B cell enhancer ABC_E3973 Neighboring gene STARR-positive B cell enhancer ABC_E10687 Neighboring gene STARR-seq mESC enhancer starr_29995 Neighboring gene microRNA 22 Neighboring gene TLC domain containing 2 Neighboring gene STARR-positive B cell enhancer ABC_E591 Neighboring gene pre-mRNA processing factor 8

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (2) 
    • Targeted (1)  1 citation

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_030711.2 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AL591496
      Related
      ENSMUST00000149940.2
    2. NR_190554.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AL591496
    3. NR_190555.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AL591496
    4. NR_190556.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AL591496

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000077.7 Reference GRCm39 C57BL/6J

      Range
      75352365..75357516
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)