mmp13l.L matrix metallopeptidase 13 (collagenase 3) like L homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: mmp13l.L
Official Full Name: matrix metallopeptidase 13 (collagenase 3) like L homeolog
Primary source: Xenbase:XB-GENE-17331012
Locus tag: XELAEV_18013829mg
See related: EnsemblRapid:ENSXLAG00005000970 AllianceGenome:Xenbase:XB-GENE-17331012
Gene type: protein coding
RefSeq status: MODEL
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as: mmp13; mmp-13
Summary: Predicted to enable collagen binding activity; metal ion binding activity; and metalloendopeptidase activity. Predicted to act upstream of or within bone morphogenesis; collagen catabolic process; and extracellular matrix disassembly. Predicted to be located in extracellular matrix and extracellular region. [provided by Alliance of Genome Resources, Jan 2025]
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Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	2L	NC_054373.1 (169013868..169022056, complement)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	2L	NC_030726.1 (163120749..163128948, complement)

Chromosome 2L - NC_054373.1 Genomic Context describing neighboring genes

Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

XCL3 and XCL4 can be differentially induced by prolactin and thyroid hormone(3)
Title: Activity and expression of Xenopus laevis matrix metalloproteinases: identification of a novel role for the hormone prolactin in regulating collagenolysis in both amphibians and mammals.

Submit: New GeneRIF Correction

Function	Evidence Code	Pubs
enables calcium ion binding	ISS Inferred from Sequence or Structural Similarity more info
enables collagen binding	ISS Inferred from Sequence or Structural Similarity more info
enables metal ion binding	IEA Inferred from Electronic Annotation more info
enables metalloendopeptidase activity	IEA Inferred from Electronic Annotation more info
enables metalloendopeptidase activity	ISS Inferred from Sequence or Structural Similarity more info
enables metallopeptidase activity	IEA Inferred from Electronic Annotation more info
enables zinc ion binding	IEA Inferred from Electronic Annotation more info
enables zinc ion binding	ISS Inferred from Sequence or Structural Similarity more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within bone morphogenesis	ISS Inferred from Sequence or Structural Similarity more info
acts_upstream_of_or_within collagen catabolic process	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within collagen catabolic process	ISS Inferred from Sequence or Structural Similarity more info
acts_upstream_of_or_within extracellular matrix disassembly	ISS Inferred from Sequence or Structural Similarity more info
acts_upstream_of_or_within proteolysis	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in extracellular matrix	IEA Inferred from Electronic Annotation more info
located_in extracellular region	IEA Inferred from Electronic Annotation more info

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The following sections contain reference sequences that belong to a specific genome build. Explain