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    Adgrg6 adhesion G protein-coupled receptor G6 [ Mus musculus (house mouse) ]

    Gene ID: 215798, updated on 27-Nov-2024

    Summary

    Official Symbol
    Adgrg6provided by MGI
    Official Full Name
    adhesion G protein-coupled receptor G6provided by MGI
    Primary source
    MGI:MGI:1916151
    See related
    Ensembl:ENSMUSG00000039116 AllianceGenome:MGI:1916151
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    DREG; Gm222; Gpr126; 1190004A11Rik
    Summary
    Enables laminin binding activity. Involved in several processes, including adenylate cyclase-activating G protein-coupled receptor signaling pathway; heart trabecula formation; and myelination in peripheral nervous system. Predicted to be located in cell surface and cytoplasm. Predicted to be active in plasma membrane. Is expressed in several structures, including embryo mesenchyme; heart; musculoskeletal system; urinary system; and vascular system. Used to study idiopathic scoliosis. Human ortholog(s) of this gene implicated in lethal congenital contracture syndrome. Orthologous to human ADGRG6 (adhesion G protein-coupled receptor G6). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Biased expression in placenta adult (RPKM 10.1), lung adult (RPKM 8.1) and 8 other tissues See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Adgrg6 in Genome Data Viewer
    Location:
    10 A2; 10 5.43 cM
    Exon count:
    26
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 10 NC_000076.7 (14278327..14421467, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 10 NC_000076.6 (14402583..14545723, complement)

    Chromosome 10 - NC_000076.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_25826 Neighboring gene predicted gene, 24343 Neighboring gene STARR-seq mESC enhancer starr_25827 Neighboring gene STARR-seq mESC enhancer starr_25828 Neighboring gene predicted gene, 40603 Neighboring gene VISTA enhancer mm116 Neighboring gene STARR-seq mESC enhancer starr_25829 Neighboring gene STARR-seq mESC enhancer starr_25830 Neighboring gene STARR-seq mESC enhancer starr_25831 Neighboring gene ribosomal protein L23A pseudogene Neighboring gene STARR-seq mESC enhancer starr_25832 Neighboring gene STARR-seq mESC enhancer starr_25835 Neighboring gene STARR-seq mESC enhancer starr_25837 Neighboring gene predicted gene, 57851 Neighboring gene STARR-seq mESC enhancer starr_25839 Neighboring gene RIKEN cDNA 1700016L04 gene Neighboring gene STARR-positive B cell enhancer mm9_chr10:14425245-14425545 Neighboring gene vesicle (multivesicular body) trafficking 1 Neighboring gene gap junction protein, epsilon 1

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Pathways from PubChem

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables G protein-coupled receptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables G protein-coupled receptor activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables G protein-coupled receptor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables collagen binding ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables extracellular matrix binding ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables laminin binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables laminin binding IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in Schwann cell differentiation ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in adenylate cyclase-activating G protein-coupled receptor signaling pathway IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in adenylate cyclase-activating G protein-coupled receptor signaling pathway IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in adenylate cyclase-modulating G protein-coupled receptor signaling pathway ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in cAMP-mediated signaling ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in cell surface receptor signaling pathway ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in heart trabecula formation IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in heart trabecula formation IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in mitochondrion organization IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in myelination ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in myelination ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in myelination in peripheral nervous system IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in myelination in peripheral nervous system IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in cell surface ISO
    Inferred from Sequence Orthology
    more info
     
    located_in cytoplasm ISO
    Inferred from Sequence Orthology
    more info
    PubMed 
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in plasma membrane ISO
    Inferred from Sequence Orthology
    more info
    PubMed 

    General protein information

    Preferred Names
    adhesion G-protein coupled receptor G6
    Names
    G protein coupled receptor Gpr126
    G-protein coupled receptor 126
    developmentally regulated G-protein-coupled receptor
    probable G-protein coupled receptor 126

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001002268.3NP_001002268.1  adhesion G-protein coupled receptor G6 precursor

      See identical proteins and their annotated locations for NP_001002268.1

      Status: VALIDATED

      Source sequence(s)
      AB183545, AC118202
      Consensus CDS
      CCDS35848.1
      UniProtKB/Swiss-Prot
      Q6F3F9, Q811E4
      UniProtKB/TrEMBL
      A0A140LIH4
      Related
      ENSMUSP00000043055.5, ENSMUST00000041168.6
      Conserved Domains (5) summary
      smart00303
      Location:771822
      GPS; G-protein-coupled receptor proteolytic site domain
      cd00041
      Location:38146
      CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
      cl02422
      Location:505550
      HRM; Hormone receptor domain
      cl21561
      Location:8331080
      7tm_4; Olfactory receptor
      cl22861
      Location:178337
      LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000076.7 Reference GRCm39 C57BL/6J

      Range
      14278327..14421467 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_030245001.1XP_030100861.1  adhesion G-protein coupled receptor G6 isoform X5

      UniProtKB/TrEMBL
      A0A140LIH4, A0A571BEJ4
      Related
      ENSMUSP00000158717.2, ENSMUST00000238680.2
      Conserved Domains (6) summary
      cd00041
      Location:38146
      CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
      cd14964
      Location:833858
      7tm_GPCRs; TM helix 1 [structural motif]
      pfam01825
      Location:771816
      GPS; GPCR proteolysis site, GPS, motif
      cl02422
      Location:505550
      HRM; Hormone receptor domain
      cl22861
      Location:178337
      LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
      cl28897
      Location:8311099
      7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily
    2. XM_006512679.4XP_006512742.1  adhesion G-protein coupled receptor G6 isoform X2

      UniProtKB/TrEMBL
      A0A140LIH4
      Conserved Domains (6) summary
      cd00041
      Location:38146
      CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
      cd14964
      Location:861886
      7tm_GPCRs; TM helix 1 [structural motif]
      pfam01825
      Location:799844
      GPS; GPCR proteolysis site, GPS, motif
      cl02422
      Location:533578
      HRM; Hormone receptor domain
      cl22861
      Location:178337
      LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
      cl28897
      Location:8591127
      7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily
    3. XM_006512681.4XP_006512744.1  adhesion G-protein coupled receptor G6 isoform X4

      UniProtKB/TrEMBL
      A0A140LIH4
      Conserved Domains (6) summary
      cd00041
      Location:48156
      CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
      cd14964
      Location:843868
      7tm_GPCRs; TM helix 1 [structural motif]
      pfam01825
      Location:781826
      GPS; GPCR proteolysis site, GPS, motif
      cl02422
      Location:515560
      HRM; Hormone receptor domain
      cl22861
      Location:188347
      LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
      cl28897
      Location:8411109
      7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily
    4. XM_036155731.1XP_036011624.1  adhesion G-protein coupled receptor G6 isoform X8

      UniProtKB/TrEMBL
      A0A140LIH4
      Conserved Domains (5) summary
      cd00041
      Location:48156
      CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
      pfam01825
      Location:781826
      GPS; GPCR proteolysis site, GPS, motif
      cd14964
      Location:843868
      7tm_GPCRs; TM helix 1 [structural motif]
      cl22861
      Location:188347
      LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
      cl28897
      Location:8411109
      7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily
    5. XM_006512678.4XP_006512741.1  adhesion G-protein coupled receptor G6 isoform X1

      UniProtKB/TrEMBL
      A0A140LIH4
      Conserved Domains (6) summary
      cd00041
      Location:48156
      CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
      cd14964
      Location:871896
      7tm_GPCRs; TM helix 1 [structural motif]
      pfam01825
      Location:809854
      GPS; GPCR proteolysis site, GPS, motif
      cl02422
      Location:543588
      HRM; Hormone receptor domain
      cl22861
      Location:188347
      LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
      cl28897
      Location:8691137
      7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily
    6. XM_017313881.2XP_017169370.1  adhesion G-protein coupled receptor G6 isoform X7

      UniProtKB/TrEMBL
      A0A140LIH4
      Conserved Domains (5) summary
      cd00041
      Location:48156
      CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
      cd14964
      Location:871896
      7tm_GPCRs; TM helix 1 [structural motif]
      pfam01825
      Location:809854
      GPS; GPCR proteolysis site, GPS, motif
      cl22861
      Location:188347
      LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
      cl28897
      Location:8691137
      7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily
    7. XM_006512680.3XP_006512743.1  adhesion G-protein coupled receptor G6 isoform X3

      UniProtKB/TrEMBL
      A0A140LIH4
      Conserved Domains (6) summary
      cd00041
      Location:37145
      CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
      cd14964
      Location:860885
      7tm_GPCRs; TM helix 1 [structural motif]
      pfam01825
      Location:798843
      GPS; GPCR proteolysis site, GPS, motif
      cl02422
      Location:532577
      HRM; Hormone receptor domain
      cl22861
      Location:177336
      LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
      cl28897
      Location:8581126
      7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily
    8. XM_006512682.5XP_006512745.1  adhesion G-protein coupled receptor G6 isoform X6

      UniProtKB/TrEMBL
      A0A140LIH4
      Related
      ENSMUSP00000146821.2, ENSMUST00000208429.3
      Conserved Domains (5) summary
      cd00041
      Location:48156
      CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
      cd14964
      Location:871896
      7tm_GPCRs; TM helix 1 [structural motif]
      pfam01825
      Location:809854
      GPS; GPCR proteolysis site, GPS, motif
      cl22861
      Location:188347
      LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
      cl28897
      Location:8691137
      7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily