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    Myl7 myosin, light polypeptide 7, regulatory [ Mus musculus (house mouse) ]

    Gene ID: 17898, updated on 27-Nov-2024

    Summary

    Official Symbol
    Myl7provided by MGI
    Official Full Name
    myosin, light polypeptide 7, regulatoryprovided by MGI
    Primary source
    MGI:MGI:107495
    See related
    Ensembl:ENSMUSG00000020469 AllianceGenome:MGI:107495
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    MLC2a; MYL2A; RLC-A; Mylc2a; MLC-2alpha
    Summary
    Predicted to enable calcium ion binding activity. Predicted to be involved in cardiac muscle tissue development and heart contraction. Located in dendritic spine. Is expressed in several structures, including gastrocnemius muscle; heart; liver; uterus; and vascular system. Orthologous to human MYL7 (myosin light chain 7). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Biased expression in heart adult (RPKM 358.9), lung adult (RPKM 59.1) and 1 other tissue See more
    Orthologs
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    Genomic context

    See Myl7 in Genome Data Viewer
    Location:
    11 A1; 11 3.88 cM
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (5846637..5848782, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (5896637..5898782, complement)

    Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene AE binding protein 1 Neighboring gene STARR-positive B cell enhancer ABC_E6946 Neighboring gene polymerase (DNA directed), delta 2, regulatory subunit Neighboring gene predicted gene, 53664 Neighboring gene glucokinase Neighboring gene predicted gene 11967 Neighboring gene STARR-seq mESC enhancer starr_28446 Neighboring gene predicted gene, 53665

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables calcium ion binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in cardiac muscle tissue development IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in heart contraction IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    located_in A band IEA
    Inferred from Electronic Annotation
    more info
     
    located_in A band ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in dendritic spine IDA
    Inferred from Direct Assay
    more info
    PubMed 
    is_active_in myofibril IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of myosin complex IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    myosin regulatory light chain 2, atrial isoform
    Names
    MLC-2a
    myosin light chain 2a
    myosin light chain, regulatory A
    myosin regulatory light chain 7

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_022879.2NP_075017.2  myosin regulatory light chain 2, atrial isoform

      See identical proteins and their annotated locations for NP_075017.2

      Status: VALIDATED

      Source sequence(s)
      AJ348866, AK146716, CA461005
      Consensus CDS
      CCDS24408.1
      UniProtKB/Swiss-Prot
      Q63977, Q9JIE8, Q9QVP4
      UniProtKB/TrEMBL
      Q5SVI8
      Related
      ENSMUSP00000099985.4, ENSMUST00000102921.4
      Conserved Domains (1) summary
      COG5126
      Location:22169
      FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000077.7 Reference GRCm39 C57BL/6J

      Range
      5846637..5848782 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)