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    Tex13c3 TEX13 family member C3 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 100360128, updated on 17-Aug-2024

    Summary

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    Official Symbol
    Tex13c3provided by RGD
    Official Full Name
    TEX13 family member C3provided by RGD
    Primary source
    RGD:2322721
    See related
    AllianceGenome:RGD:2322721
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Expression
    Biased expression in Lung (RPKM 7.6), Testes (RPKM 6.6) and 9 other tissues See more
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    Genomic context

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    See Tex13c3 in Genome Data Viewer
    Location:
    Xq35
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) X NC_086039.1 (122017204..122018753)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) X NC_051356.1 (117151627..117153132)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) X NC_005120.4 (124692036..124693840)

    Chromosome X - NC_086039.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 255A Neighboring gene ATPase Na+/K+ transporting family member beta 4 Neighboring gene lysosomal-associated membrane protein 2 Neighboring gene ragulator complex protein LAMTOR5-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    testis-expressed protein 13C-1-like
    Names
    testis-expressed sequence 13C protein-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086039.1 Reference GRCr8

      Range
      122017204..122018753
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002730175.5 → XP_002730221.1  testis-expressed protein 13C-1-like

      See identical proteins and their annotated locations for XP_002730221.1

      UniProtKB/TrEMBL
      A0A8I6G6Y1
      Conserved Domains (1) summary
      pfam15186
      Location:6 → 148
      TEX13; Testis-expressed sequence 13 protein family
    Nucleotide Protein Strain
    Heading Accession and Version

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