Rtl8c retrotransposon Gag like 8C [Mus musculus (house mouse)] - Gene

Summary

Official Symbol: Rtl8cprovided by MGI
Official Full Name: retrotransposon Gag like 8Cprovided by MGI
Primary source: MGI:MGI:1920115
See related: Ensembl:ENSMUSG00000051851 AllianceGenome:MGI:1920115
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Mus musculus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as: Cxx1c; Mar8.1; Mart8a; 2900027G03Rik
Summary: Is expressed in cranial ganglion; dorsal root ganglion; and neural retina. Orthologous to several human genes including RTL8A (retrotransposon Gag like 8A) and RTL8B (retrotransposon Gag like 8B). [provided by Alliance of Genome Resources, Dec 2024]
Expression: Broad expression in cerebellum adult (RPKM 113.8), adrenal adult (RPKM 112.3) and 23 other tissues See more
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Genomic context

Location:: X A5; X 29.82 cM

Exon count:: 2

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCm39 (GCF_000001635.27)	X	NC_000086.8 (52609889..52611102)
108.20200622	previous assembly	GRCm38.p6 (GCF_000001635.26)	X	NC_000086.7 (53607922..53609135)

Chromosome X - NC_000086.8 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Mouse ENCODE transcriptome data
Description: RNA profiling data sets generated by the Mouse ENCODE project.
BioProject: PRJNA66167
Publication: PMID 25409824
Analysis date: n/a

Bibliography

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GeneRIFs: Gene References Into Functions

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General gene information

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Gene Ontology Provided by MGI

Function	Evidence Code	Pubs
enables molecular_function	ND No biological Data available more info

Process	Evidence Code	Pubs
involved_in biological_process	ND No biological Data available more info

General protein information

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Preferred Names: CAAX box 1 homolog C

Names: CAAX box 1C; mammalian retrotransposon derived 8a

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.