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    Sprr2j-ps small proline-rich protein 2J, pseudogene [ Mus musculus (house mouse) ]

    Gene ID: 20764, updated on 17-Aug-2024

    Summary

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    Official Symbol
    Sprr2j-psprovided by MGI
    Official Full Name
    small proline-rich protein 2J, pseudogeneprovided by MGI
    Primary source
    MGI:MGI:1330345
    See related
    Ensembl:ENSMUSG00000027925 AllianceGenome:MGI:1330345
    Gene type
    pseudo
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Sprr2j
    Expression
    Restricted expression toward stomach adult (RPKM 8.3) See more
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    Genomic context

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    See Sprr2j-ps in Genome Data Viewer
    Location:
    3 F1; 3 40.14 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 3 NC_000069.7 (92325394..92326703)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 3 NC_000069.6 (92418087..92419396)

    Chromosome 3 - NC_000069.7Genomic Context describing neighboring genes Neighboring gene small proline-rich protein 2H Neighboring gene small proline-rich protein 2I Neighboring gene adhesion regulating molecule 1B Neighboring gene small proline-rich protein 2K

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Long-range comparison of human and mouse Sprr loci to identify conserved noncoding sequences involved in coordinate regulation. Martin N, et al. Genome Res, 2004 Dec. PMID 15574822, Free PMC Article
    2. Mouse Sprr locus: a tandem array of coordinately regulated genes. Patel S, et al. Mamm Genome, 2003 Feb. PMID 12584609
    3. Estrogen regulates the expression of the small proline-rich 2 gene family in the mouse uterus. Hong SH, et al. Mol Cells, 2004 Jun 30. PMID 15232223
    4. Mouse Sprr2 genes: a clustered family of genes showing differential expression in epithelial tissues. Song HJ, et al. Genomics, 1999 Jan 1. PMID 9888996
    5. BGEM: an in situ hybridization database of gene expression in the embryonic and adult mouse nervous system. Magdaleno S, et al. PLoS Biol, 2006 Apr. PMID 16602821, Free PMC Article

    See all (15) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_003185.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AK019074
      Related
      ENSMUST00000029533.3

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000069.7 Reference GRCm39 C57BL/6J

      Range
      92325394..92326703
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    O70561.2 GenPept UniProtKB/Swiss-Prot:O70561

    Gene LinkOut

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