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    Frg2f1 FSHD region gene 2 family member 1 [ Mus musculus (house mouse) ]

    Gene ID: 433752, updated on 27-Nov-2024

    Summary

    Official Symbol
    Frg2f1provided by MGI
    Official Full Name
    FSHD region gene 2 family member 1provided by MGI
    Primary source
    MGI:MGI:3035485
    See related
    Ensembl:ENSMUSG00000087385 AllianceGenome:MGI:3035485
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Summary
    Orthologous to several human genes including FRG2 (FSHD region gene 2) and FRG2B (FSHD region gene 2 family member B). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Ubiquitous expression in CNS E18 (RPKM 2.4), CNS E14 (RPKM 1.6) and 28 other tissues See more
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    Genomic context

    See Frg2f1 in Genome Data Viewer
    Location:
    4 D2.1; 4 55.43 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (119387505..119395966, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (119530308..119538769, complement)

    Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene predicted gene 12957 Neighboring gene U6 small nuclear RNA, pseudogene 2 Neighboring gene forkhead box J3 Neighboring gene STARR-seq mESC enhancer starr_11236 Neighboring gene guanylate cyclase activator 2a (guanylin)

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (2) 

    General gene information

    Markers

    Clone Names

    • MGC73851, MGC100084

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    General protein information

    Preferred Names
    FSHD region gene 2 family member 1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001004178.1NP_001004178.1  FSHD region gene 2 family member 1

      See identical proteins and their annotated locations for NP_001004178.1

      Status: PROVISIONAL

      Source sequence(s)
      BC076608
      Consensus CDS
      CCDS51291.1
      UniProtKB/TrEMBL
      Q6P3A2
      Related
      ENSMUSP00000078560.7, ENSMUST00000079611.13
      Conserved Domains (1) summary
      pfam15315
      Location:31190
      FRG2; Facioscapulohumeral muscular dystrophy candidate 2

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000070.7 Reference GRCm39 C57BL/6J

      Range
      119387505..119395966 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)