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    Abhd11os abhydrolase domain containing 11, opposite strand [ Mus musculus (house mouse) ]

    Gene ID: 69812, updated on 22-Oct-2024

    Summary

    Official Symbol
    Abhd11osprovided by MGI
    Official Full Name
    abhydrolase domain containing 11, opposite strandprovided by MGI
    Primary source
    MGI:MGI:1917062
    See related
    Ensembl:ENSMUSG00000121867 AllianceGenome:MGI:1917062
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Wbscr26; Wnscr26; 2010001M06Rik
    Expression
    Biased expression in large intestine adult (RPKM 52.7), duodenum adult (RPKM 45.5) and 14 other tissues See more
    Orthologs
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    Genomic context

    See Abhd11os in Genome Data Viewer
    Location:
    5 G2; 5 74.94 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (135040976..135042011, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (135012122..135013157, complement)

    Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene Williams Beuren syndrome chromosome region 25 (human) Neighboring gene predicted gene, 57747 Neighboring gene CapStarr-seq enhancer MGSCv37_chr5:135484761-135484944 Neighboring gene ribosomal protein S29, pseudogene Neighboring gene abhydrolase domain containing 11 Neighboring gene syntaxin 1A (brain) Neighboring gene predicted gene, 25492 Neighboring gene BUD23, rRNA methyltransferase and ribosome maturation factor

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 

    General gene information

    Markers

    Other Names

    • Abhd11 opposite strand transcript
    • Williams Beuren syndrome chromosome region 26

    Clone Names

    • AC084109.5

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     
    is_active_in intracellular anatomical structure IDA
    Inferred from Direct Assay
    more info
    PubMed 

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_026688.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AI120671, AI462243, W18457
      Related
      ENSMUST00000378292.1

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000071.7 Reference GRCm39 C57BL/6J

      Range
      135040976..135042011 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)