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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001042552.3 → NP_001036017.1 putative deoxyribonuclease TATDN3 isoform 1
See identical proteins and their annotated locations for NP_001036017.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) encodes isoform 1.
- Source sequence(s)
-
AC104333, BC113638, DB351940
- Consensus CDS
-
CCDS31019.1
- UniProtKB/Swiss-Prot
- A6NGS3, B7Z1C1, B7Z978, B7ZLQ6, E9PJE5, E9PNH3, G3V151, Q17R31, Q4G0L1
- Related
- ENSP00000355941.4, ENST00000366974.9
- Conserved Domains (1) summary
-
- pfam01026
Location:9 → 265
- TatD_DNase; TatD related DNase
-
NM_001042553.3 → NP_001036018.1 putative deoxyribonuclease TATDN3 isoform 2
See identical proteins and their annotated locations for NP_001036018.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) uses an alternate in-frame splice site in the 3' coding region compared to variant 1. This results in a shorter protein (isoform 2) compared to isoform 1.
- Source sequence(s)
-
AC104333, BC143956, DB351940
- Consensus CDS
-
CCDS41465.1
- UniProtKB/Swiss-Prot
-
Q17R31
- Related
- ENSP00000355940.4, ENST00000366973.8
- Conserved Domains (1) summary
-
- pfam01026
Location:9 → 264
- TatD_DNase; TatD related DNase
-
NM_001146169.2 → NP_001139641.1 putative deoxyribonuclease TATDN3 isoform 3
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) uses two alternate splice sites in the 3' coding region compared to variant 1, one of which results in a frameshift. The encoded isoform (3) has a shorter and distinct C-terminus compared to isoform 1.
- Source sequence(s)
-
AC104333, BC143957, DB351940
- Consensus CDS
-
CCDS53476.1
- UniProtKB/Swiss-Prot
-
Q17R31
- Related
- ENSP00000433755.1, ENST00000531963.5
- Conserved Domains (1) summary
-
- cd01310
Location:8 → 233
- TatD_DNAse; TatD like proteins; E.coli TatD is a cytoplasmic protein, shown to have magnesium dependent DNase activity.
-
NM_001146170.2 → NP_001139642.1 putative deoxyribonuclease TATDN3 isoform 4
Status: VALIDATED
- Description
- Transcript Variant: This variant (4) lacks an in-frame exon in the 5' coding region compared to variant 1. The encoded isoform (4) is shorter than isoform 1.
- Source sequence(s)
-
AC104333, AK304557, DB351940
- Consensus CDS
-
CCDS53477.1
- UniProtKB/Swiss-Prot
-
Q17R31
- Related
- ENSP00000434801.1, ENST00000526641.5
- Conserved Domains (1) summary
-
- pfam01026
Location:9 → 244
- TatD_DNase; TatD related DNase
-
NM_001146171.2 → NP_001139643.1 putative deoxyribonuclease TATDN3 isoform 5
See identical proteins and their annotated locations for NP_001139643.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (5) uses an alternate in-frame splice site in the 3' coding region compared to variant 1. This results in a longer protein (isoform 5) compared to isoform 1.
- Source sequence(s)
-
AC104333, AK293129, BC143957, DB351940
- Consensus CDS
-
CCDS53475.1
- UniProtKB/Swiss-Prot
-
Q17R31
- Related
- ENSP00000431376.1, ENST00000532324.5
- Conserved Domains (1) summary
-
- pfam01026
Location:9 → 272
- TatD_DNase; TatD related DNase
-
NM_001363589.2 → NP_001350518.1 putative deoxyribonuclease TATDN3 isoform 6
Status: VALIDATED
- Description
- Transcript Variant: This variant (6) lacks an exon in the 3' coding region which causes a frameshift compared to variant 1. The encoded isoform (6) has a shorter and distinct C-terminus compared to isoform 1.
- Source sequence(s)
-
AC104333
- Conserved Domains (1) summary
-
- cl00281
Location:8 → 161
- metallo-dependent_hydrolases; Superfamily of metallo-dependent hydrolases (also called amidohydrolase superfamily) is a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a ...
-
NM_001363590.2 → NP_001350519.1 putative deoxyribonuclease TATDN3 isoform 7
Status: VALIDATED
- Description
- Transcript Variant: This variant (7) uses an alternate splice site and lacks an exon in the 3' coding region which causes a frameshift compared to variant 1. The encoded isoform (7) has a shorter and distinct C-terminus compared to isoform 1.
- Source sequence(s)
-
AC104333
- Consensus CDS
-
CCDS86050.1
- UniProtKB/TrEMBL
-
E9PP81
- Related
- ENSP00000436364.1, ENST00000526997.5
- Conserved Domains (1) summary
-
- cl00281
Location:8 → 161
- metallo-dependent_hydrolases; Superfamily of metallo-dependent hydrolases (also called amidohydrolase superfamily) is a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a ...