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    yiaT outer membrane protein YiaT [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 948097, updated on 3-Dec-2024

    Summary

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    Official Symbol
    yiaT
    Official Full Name
    outer membrane protein YiaT
    Primary source
    ECOCYC:EG12288
    Locus tag
    b3584
    See related
    ASAP:ABE-0011704
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK3573
    Summary
    First 21 aa are predicted to be a type I signal peptide. [More information is available at EcoGene: EG12288]. YiaT is a hypothetical protein. [More information is available at EcoCyc: EG12288].
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    Genomic context

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    Sequence:
    NC_000913.3 (3751128..3751868, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene pseudo Neighboring gene putative DNA-binding transcriptional regulator YiaU Neighboring gene putative membrane fusion protein YiaV Neighboring gene DUF3302 domain-containing protein YiaW

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. An efficient bacterial surface display system based on a novel outer membrane anchoring element from the Escherichia coli protein YiaT. Han MJ, et al. FEMS Microbiol Lett, 2015 Jan. PMID 25790485
    2. Molecular analysis of porin gene transcription in heterogenotypic multidrug-resistant Escherichia coli isolates from scouring calves. Vinson HM, et al. J Antimicrob Chemother, 2010 Sep. PMID 20639525
    3. The beta-barrel finder (BBF) program, allowing identification of outer membrane beta-barrel proteins encoded within prokaryotic genomes. Zhai Y, et al. Protein Sci, 2002 Sep. PMID 12192075, Free PMC Article
    4. BOMP: a program to predict integral beta-barrel outer membrane proteins encoded within genomes of Gram-negative bacteria. Berven FS, et al. Nucleic Acids Res, 2004 Jul 1. PMID 15215418, Free PMC Article
    5. Analysis of the Escherichia coli genome. V. DNA sequence of the region from 76.0 to 81.5 minutes. Sofia HJ, et al. Nucleic Acids Res, 1994 Jul 11. PMID 8041620, Free PMC Article

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. These results indirectly suggest that TolC and YiaT proteins may play some role(s) in multidrug resistance.
      Title: Molecular analysis of porin gene transcription in heterogenotypic multidrug-resistant Escherichia coli isolates from scouring calves.
    Submit: New GeneRIF Correction

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Process Evidence Code Pubs
    involved_in peptidoglycan biosynthetic process IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cell outer membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in cell outer membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in cell outer membrane IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    outer membrane protein YiaT

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      3751128..3751868 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_418041.1 outer membrane protein YiaT [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_418041.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A5B9AMY3
      Conserved Domains (1) summary
      COG3713
      Location:1 → 246
      OmpV; Outer membrane scaffolding protein for murein synthesis, MipA/OmpV family [Cell wall/membrane/envelope biogenesis]
    Nucleotide Protein
    Heading Accession and Version

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