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    ydeT fimbrial usher domain-containing protein YdeT [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 946042, updated on 17-Dec-2024

    Summary

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    Official Symbol
    ydeT
    Official Full Name
    fimbrial usher domain-containing protein YdeT
    Primary source
    ECOCYC:G6795
    Locus tag
    b1505
    See related
    ASAP:ABE-0005017
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK1498; fmlC
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    Genomic context

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    Sequence:
    NC_000913.3 (1588853..1590001, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene putative fimbrial protein YdeR Neighboring gene putative fimbrial protein YdeS Neighboring gene pseudo Neighboring gene serine/threonine-protein kinase toxin HipA Neighboring gene antitoxin/DNA-binding transcriptional repressor HipB

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Evidence for a novel domain of bacterial outer membrane ushers. Capitani G, et al. Proteins, 2006 Dec 1. PMID 17066380
    2. Bacterial outer membrane ushers contain distinct targeting and assembly domains for pilus biogenesis. Thanassi DG, et al. J Bacteriol, 2002 Nov. PMID 12399496, Free PMC Article
    3. Analysis of the requirements for pilus biogenesis at the outer membrane usher and the function of the usher C-terminus. So SS, et al. Mol Microbiol, 2006 Apr. PMID 16573686
    4. The outer membrane usher forms a twin-pore secretion complex. Li H, et al. J Mol Biol, 2004 Dec 10. PMID 15561151
    5. Chaperone-subunit-usher interactions required for donor strand exchange during bacterial pilus assembly. Barnhart MM, et al. J Bacteriol, 2003 May. PMID 12700251, Free PMC Article

    See all (15) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables fimbrial usher porin activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables fimbrial usher porin activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in pilus assembly IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in pilus assembly IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cell outer membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    fimbrial usher domain-containing protein YdeT

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      1588853..1590001 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. YP_009518785.1 fimbrial usher domain-containing protein YdeT [Escherichia coli str. K-12 substr. MG1655]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A2X7JWB2, A0AAX0KC08
      Conserved Domains (1) summary
      COG3188
      Location:20 → 382
      FimD; Outer membrane usher protein FimD/PapC [Cell motility, Extracellular structures]
    Nucleotide Protein
    Heading Accession and Version

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