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    dcuD putative transporter DcuD [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 946575, updated on 3-Dec-2024

    Summary

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    Official Symbol
    dcuD
    Official Full Name
    putative transporter DcuD
    Primary source
    ECOCYC:G7679
    Locus tag
    b3227
    See related
    ASAP:ABE-0010589
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK3216; yhcL
    Summary
    IT (Ion Transporter) superfamily (Prakash, 2003). [More information is available at EcoGene: EG12818]. The DcuD protein is an uncharacterized member of the DcuC family of anaerobic dicarboxylate transporters . dcuD is either not expressed or is expressed under conditions unrelated to carboxylate metabolism. [More information is available at EcoCyc: G7679].
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    Genomic context

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    Sequence:
    NC_000913.3 (3374869..3376236)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene N-acetylneuraminate lyase Neighboring gene NanR Neighboring gene ClpXP protease specificity-enhancing factor Neighboring gene stringent starvation protein A

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Evidence for Escherichia coli DcuD carrier dependent F(O)F(1)-ATPase activity during fermentation of glycerol. Karapetyan L, et al. Sci Rep, 2019 Mar 12. PMID 30862913, Free PMC Article
    2. The dcuD (former yhcL) gene product of escherichia coli as a member of the DcuC family of C4-dicarboxylate carriers: lack of evident expression. Janausch IG, et al. Arch Microbiol, 1999 Oct. PMID 10525738
    3. Influence of C(4) -Dcu transporters on hydrogenase and formate dehydrogenase activities in stationary phase-grown fermenting Escherichia coli. Karapetyan L, et al. IUBMB Life, 2020 Aug. PMID 32277802
    4. DctA- and Dcu-independent transport of succinate in Escherichia coli: contribution of diffusion and of alternative carriers. Janausch IG, et al. Arch Microbiol, 2001 Sep. PMID 11511871
    5. Domain structure and pore loops in the 2-hydroxycarboxylate transporter family. Lolkema JS. J Mol Microbiol Biotechnol, 2006. PMID 17114896

    See all (16) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Influence of C4 -Dcu transporters on hydrogenase and formate dehydrogenase activities in stationary phase-grown fermenting Escherichia coli.
      Title: Influence of C(4) -Dcu transporters on hydrogenase and formate dehydrogenase activities in stationary phase-grown fermenting Escherichia coli.
    Submit: New GeneRIF Correction

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables C4-dicarboxylate transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in C4-dicarboxylate transport IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in C4-dicarboxylate transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within anaerobic glycerol catabolic process IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in plasma membrane ISM
    Inferred from Sequence Model
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    putative transporter DcuD

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      3374869..3376236
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_417694.1 putative transporter DcuD [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_417694.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A376Y1P7
      Conserved Domains (1) summary
      PRK09804
      Location:1 → 455
      PRK09804; C4-dicarboxylate transporter DcuC
    Nucleotide Protein
    Heading Accession and Version

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