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    yihV 6-deoxy-6-sulfofructose kinase [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 948382, updated on 17-Dec-2024

    Summary

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    Official Symbol
    yihV
    Official Full Name
    6-deoxy-6-sulfofructose kinase
    Primary source
    ECOCYC:EG11848
    Locus tag
    b3883
    See related
    ASAP:ABE-0012681
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK3876; squV
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    Genomic context

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    Sequence:
    NC_000913.3 (4073739..4074635)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene 6-deoxy-6-sulfofructose-1-phosphate aldolase Neighboring gene 3-sulfolactaldehyde reductase Neighboring gene DNA-binding transcriptional dual regulator CsqR Neighboring gene alpha-D-glucose-1-phosphate phosphatase YihX Neighboring gene PF03631 family membrane protein YihY

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sulphoglycolysis in Escherichia coli K-12 closes a gap in the biogeochemical sulphur cycle. Denger K, et al. Nature, 2014 Mar 6. PMID 24463506
    2. Quantitative whole-genome analysis of DNA-protein interactions by in vivo methylase protection in E. coli. Tavazoie S, et al. Nat Biotechnol, 1998 Jun. PMID 9624689
    3. Salmonella produces an O-antigen capsule regulated by AgfD and important for environmental persistence. Gibson DL, et al. J Bacteriol, 2006 Nov. PMID 17079680, Free PMC Article
    4. Analysis of the Escherichia coli genome. III. DNA sequence of the region from 87.2 to 89.2 minutes. Plunkett G 3rd, et al. Nucleic Acids Res, 1993 Jul 25. PMID 8346018, Free PMC Article
    5. Global analysis of candidate genes important for fitness in a competitive biofilm using DNA-array-based transposon mapping. Junker LM, et al. Microbiology (Reading), 2006 Aug. PMID 16849790

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables 6-deoxy-6-sulfofructose kinase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables 6-deoxy-6-sulfofructose kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables transferase activity, transferring phosphorus-containing groups IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in 6-sulfoquinovose(1-) catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within 6-sulfoquinovose(1-) catabolic process IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within 6-sulfoquinovose(1-) catabolic process to glycerone phosphate and 3-sulfolactaldehyde IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within carbohydrate phosphorylation IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    involved_in phosphate-containing compound metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cytosol IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    6-deoxy-6-sulfofructose kinase
    NP_418319.2

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      4073739..4074635
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_418319.2 6-deoxy-6-sulfofructose kinase [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_418319.2

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A1X3J9L5
      Conserved Domains (1) summary
      cd01945
      Location:3 → 286
      ribokinase_group_B; Ribokinase-like subgroup B. Found in bacteria and plants, this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time. .
    Nucleotide Protein
    Heading Accession and Version

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