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    ppnP nucleoside phosphorylase PpnP [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 945048, updated on 17-Dec-2024

    Summary

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    Official Symbol
    ppnP
    Official Full Name
    nucleoside phosphorylase PpnP
    Primary source
    ECOCYC:EG12159
    Locus tag
    b0391
    See related
    ASAP:ABE-0001360
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK0386; yaiE
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    Genomic context

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    Sequence:
    NC_000913.3 (408177..408461)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene protein YaiA Neighboring gene protein AroM Neighboring gene pseudo Neighboring gene protein YkiD Neighboring gene nucleoid-associated protein RdgC

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Crystal structures of a new class of pyrimidine/purine nucleoside phosphorylase revealed a Cupin fold. Wen Y, et al. Proteins, 2022 Jun. PMID 35094440
    2. Recombination-dependent growth in exonuclease-depleted recBC sbcBC strains of Escherichia coli K-12. Ryder L, et al. Genetics, 1996 Jul. PMID 8807285, Free PMC Article
    3. Nontargeted in vitro metabolomics for high-throughput identification of novel enzymes in Escherichia coli. Sévin DC, et al. Nat Methods, 2017 Feb. PMID 27941785
    4. Protein abundance profiling of the Escherichia coli cytosol. Ishihama Y, et al. BMC Genomics, 2008 Feb 27. PMID 18304323, Free PMC Article
    5. A functional update of the Escherichia coli K-12 genome. Serres MH, et al. Genome Biol, 2001. PMID 11574054, Free PMC Article

    See all (9) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables deoxyuridine phosphorylase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables glycosyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables guanosine phosphorylase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables protein homodimerization activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables purine-nucleoside phosphorylase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables purine-nucleoside phosphorylase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables purine-nucleoside phosphorylase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables pyrimidine-nucleoside phosphorylase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables pyrimidine-nucleoside phosphorylase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables pyrimidine-nucleoside phosphorylase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables thymidine phosphorylase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables uridine phosphorylase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cytosol IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in cytosol IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    nucleoside phosphorylase PpnP
    NP_414925.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      408177..408461
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_414925.1 nucleoside phosphorylase PpnP [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_414925.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A8S0G0E8
      Conserved Domains (1) summary
      PRK10579
      Location:1 → 94
      PRK10579; pyrimidine/purine nucleoside phosphorylase
    Nucleotide Protein
    Heading Accession and Version

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