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    gnsB protein GnsB [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 946054, updated on 17-Dec-2024

    Summary

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    Official Symbol
    gnsB
    Official Full Name
    protein GnsB
    Primary source
    ECOCYC:G6823
    Locus tag
    b1550
    See related
    ASAP:ABE-0005177
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK1544; ydfY
    Summary
    The Escherichia coli CFT073 gnsB ortholog is annotated as an 88 amino acid protein due to extension of N-terminus. [More information is available at EcoGene: EG13837]. GnsA and GnsB affect unsaturated fatty acid abundance and membrane fluidity . [More information is available at EcoCyc: G6823].
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    Genomic context

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    Sequence:
    NC_000913.3 (1637609..1637782, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene DUF3950 domain-containing protein YnfO Neighboring gene DUF1398 domain-containing protein YdfO Neighboring gene protein YnfN Neighboring gene protein YnfR

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Overexpression of yccL (gnsA) and ydfY (gnsB) increases levels of unsaturated fatty acids and suppresses both the temperature-sensitive fabA6 mutation and cold-sensitive secG null mutation of Escherichia coli. Sugai R, et al. J Bacteriol, 2001 Oct. PMID 11544213, Free PMC Article
    2. Prophages and bacterial genomics: what have we learned so far? Casjens S. Mol Microbiol, 2003 Jul. PMID 12886937
    3. Optimized fragmentation schemes and data analysis strategies for proteome-wide cross-link identification. Liu F, et al. Nat Commun, 2017 May 19. PMID 28524877, Free PMC Article
    4. Protein abundance profiling of the Escherichia coli cytosol. Ishihama Y, et al. BMC Genomics, 2008 Feb 27. PMID 18304323, Free PMC Article
    5. The binary protein-protein interaction landscape of Escherichia coli. Rajagopala SV, et al. Nat Biotechnol, 2014 Mar. PMID 24561554, Free PMC Article

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Gene Ontology Provided by EcoCyc

    Process Evidence Code Pubs
    acts_upstream_of_or_within unsaturated fatty acid biosynthetic process EXP
    Inferred from Experiment
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein GnsB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      1637609..1637782 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_416068.2 protein GnsB [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_416068.2

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A7I6H2B9
      Conserved Domains (1) summary
      pfam08178
      Location:1 → 54
      GnsAB_toxin; GnsA/GnsB toxin of bacterial toxin-antitoxin system
    Nucleotide Protein
    Heading Accession and Version

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