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    yfdQ DUF2303 domain-containing protein YfdQ [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 946827, updated on 3-Dec-2024

    Summary

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    Official Symbol
    yfdQ
    Official Full Name
    DUF2303 domain-containing protein YfdQ
    Primary source
    ECOCYC:G7229
    Locus tag
    b2360
    See related
    ASAP:ABE-0007788
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK2354
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    Genomic context

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    Sequence:
    NC_000913.3 (2474032..2474856)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene uncharacterized protein YfdN Neighboring gene protein YdfO Neighboring gene uncharacterized protein YfdP Neighboring gene 5'-deoxynucleotidase Neighboring gene protein YfdS Neighboring gene protein YfdT Neighboring gene putative uncharacterized protein YpdJ

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Phages Mediate Bacterial Self-Recognition. Song S, et al. Cell Rep, 2019 Apr 16. PMID 30995473
    2. Control and regulation of KplE1 prophage site-specific recombination: a new recombination module analyzed. Panis G, et al. J Biol Chem, 2007 Jul 27. PMID 17545146
    3. Systems based mapping demonstrates that recovery from alkylation damage requires DNA repair, RNA processing, and translation associated networks. Rooney JP, et al. Genomics, 2009 Jan. PMID 18824089, Free PMC Article
    4. Prophages and bacterial genomics: what have we learned so far? Casjens S. Mol Microbiol, 2003 Jul. PMID 12886937
    5. The binary protein-protein interaction landscape of Escherichia coli. Rajagopala SV, et al. Nat Biotechnol, 2014 Mar. PMID 24561554, Free PMC Article

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Process Evidence Code Pubs
    acts_upstream_of_or_within viral process IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    DUF2303 domain-containing protein YfdQ

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      2474032..2474856
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_416861.1 DUF2303 domain-containing protein YfdQ [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_416861.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A785IW58
      Conserved Domains (1) summary
      COG5532
      Location:6 → 273
      yfdQ; Uncharacterized conserved protein YfdQ, DUF2303 family [Function unknown]
    Nucleotide Protein
    Heading Accession and Version

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