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    yhhH PF15631 family protein YhhH [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 947993, updated on 3-Dec-2024

    Summary

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    Official Symbol
    yhhH
    Official Full Name
    PF15631 family protein YhhH
    Primary source
    ECOCYC:EG11520
    Locus tag
    b3483
    See related
    ASAP:ABE-0011373
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK3467
    Summary
    Overexpression causes abnormal biofilm architecture. ybbC and yhhH are paralogs. [More information is available at EcoGene: EG11520].
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    Genomic context

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    Sequence:
    NC_000913.3 (3623399..3623782)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene Ni(2(+)) ABC transporter ATP binding subunit NikD Neighboring gene Ni(2(+)) ABC transporter ATP binding subunit NikE Neighboring gene DNA-binding transcriptional repressor NikR Neighboring gene rhs element protein RhsB Neighboring gene pseudo Neighboring gene putative transposase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Evolutionary diversification of an ancient gene family (rhs) through C-terminal displacement. Jackson AP, et al. BMC Genomics, 2009 Dec 7. PMID 19968874, Free PMC Article
    2. Rhs elements of Escherichia coli K-12: complex composites of shared and unique components that have different evolutionary histories. Zhao S, et al. J Bacteriol, 1993 May. PMID 8387990, Free PMC Article
    3. Systematic characterization of Escherichia coli genes/ORFs affecting biofilm formation. Tenorio E, et al. FEMS Microbiol Lett, 2003 Aug 8. PMID 12900028
    4. Membranome: a database for proteome-wide analysis of single-pass membrane proteins. Lomize AL, et al. Nucleic Acids Res, 2017 Jan 4. PMID 27510400, Free PMC Article
    5. Analysis of the Escherichia coli genome. V. DNA sequence of the region from 76.0 to 81.5 minutes. Sofia HJ, et al. Nucleic Acids Res, 1994 Jul 11. PMID 8041620, Free PMC Article

    See all (9) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Component Evidence Code Pubs
    located_in plasma membrane RCA
    inferred from Reviewed Computational Analysis
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    PF15631 family protein YhhH

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      3623399..3623782
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_417940.2 PF15631 family protein YhhH [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_417940.2

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A2G4ACG3
      Conserved Domains (1) summary
      pfam15631
      Location:60 → 127
      Imm-NTF2-2; NTF2 fold immunity protein
    Nucleotide Protein
    Heading Accession and Version

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