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    yihY PF03631 family membrane protein YihY [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 948379, updated on 3-Dec-2024

    Summary

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    Official Symbol
    yihY
    Official Full Name
    PF03631 family membrane protein YihY
    Primary source
    ECOCYC:EG11851
    Locus tag
    b3886
    See related
    ASAP:ABE-0012688
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK3879; rbn
    Summary
    This is no longer thought to be the structural gene for RNase BN. [More information is available at EcoGene: EG11851]. yihY was previously thought to encode RNase BN , but it has since been shown that RNase BN is encoded by elaC . [More information is available at EcoCyc: EG11851].
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    Genomic context

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    Sequence:
    NC_000913.3 (4076146..4077018)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene 6-deoxy-6-sulfofructose kinase Neighboring gene DNA-binding transcriptional dual regulator CsqR Neighboring gene alpha-D-glucose-1-phosphate phosphatase YihX Neighboring gene D-aminoacyl-tRNA deacylase Neighboring gene putative fatty acid biosynthesis enzyme FabY Neighboring gene putative DNA-binding transcriptional regulator YiiE

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Purification and characterization of the tRNA-processing enzyme RNase BN. Callahan C, et al. J Biol Chem, 2000 Jan 14. PMID 10625642
    2. The existence of two genes between infB and rpsO in the Escherichia coli genome: DNA sequencing and S1 nuclease mapping. Sands JF, et al. Nucleic Acids Res, 1988 Nov 25. PMID 2849753, Free PMC Article
    3. Analysis of the Escherichia coli genome. III. DNA sequence of the region from 87.2 to 89.2 minutes. Plunkett G 3rd, et al. Nucleic Acids Res, 1993 Jul 25. PMID 8346018, Free PMC Article
    4. Single amino acid substitutions in either YhjD or MsbA confer viability to 3-deoxy-d-manno-oct-2-ulosonic acid-depleted Escherichia coli. Mamat U, et al. Mol Microbiol, 2008 Feb. PMID 18093093
    5. Identification and characterization of the Escherichia coli rbn gene encoding the tRNA processing enzyme RNase BN. Callahan C, et al. J Bacteriol, 1996 Dec. PMID 8955422, Free PMC Article

    See all (11) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Component Evidence Code Pubs
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    PF03631 family membrane protein YihY

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      4076146..4077018
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_418322.1 PF03631 family membrane protein YihY [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_418322.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A376MGB3
      Conserved Domains (1) summary
      PRK01637
      Location:10 → 290
      PRK01637; virulence factor BrkB family protein
    Nucleotide Protein
    Heading Accession and Version

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