U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    6030426L16Rik RIKEN cDNA 6030426L16 gene [ Mus musculus (house mouse) ]

    Gene ID: 628850, updated on 17-Aug-2024

    Summary

    Official Symbol
    6030426L16Rikprovided by MGI
    Official Full Name
    RIKEN cDNA 6030426L16 geneprovided by MGI
    Primary source
    MGI:MGI:1924364
    See related
    AllianceGenome:MGI:1924364
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    BC099486
    Expression
    Ubiquitous expression in colon adult (RPKM 1.6), duodenum adult (RPKM 1.3) and 26 other tissues See more
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See 6030426L16Rik in Genome Data Viewer
    Location:
    12; 12 A1.3
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 12 NC_000078.7 (21776823..21834558, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 12 NC_000078.6 (21726822..21784557, complement)

    Chromosome 12 - NC_000078.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_31736 Neighboring gene predicted gene, 46314 Neighboring gene transcription factor 23 pseudogene Neighboring gene predicted gene, 31624 Neighboring gene predicted gene 4036 Neighboring gene predicted gene, 46305 Neighboring gene mRNA turnover 4, pseudogene 2 Neighboring gene STARR-seq mESC enhancer starr_31737 Neighboring gene STARR-seq mESC enhancer starr_31738 Neighboring gene predicted gene, 40857 Neighboring gene predicted gene 9282 Neighboring gene predicted gene, 40856

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Clone Names

    • MGC117729

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    General protein information

    Preferred Names
    arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 2; zinc finger protein 124

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000078.7 Reference GRCm39 C57BL/6J

      Range
      21776823..21834558 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_055019593.1XP_054875568.1  zinc finger protein 124 isoform X1

    2. XM_055019595.1XP_054875570.1  arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 2 isoform X3

    3. XM_055019596.1XP_054875571.1  arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 2 isoform X4

    4. XM_055019594.1XP_054875569.1  arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 2 isoform X2

    RNA

    1. XR_001780512.1 RNA Sequence

    2. XR_001780509.3 RNA Sequence