sec14l1 SEC14-like lipid binding 1 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: sec14l1provided by ZNC
Official Full Name: SEC14-like lipid binding 1provided by ZNC
Primary source: ZFIN:ZDB-GENE-040426-801
See related: Ensembl:ENSDARG00000103991 AllianceGenome:ZFIN:ZDB-GENE-040426-801
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: zgc:55783
Summary: Predicted to enable RIG-I binding activity. Predicted to be involved in negative regulation of RIG-I signaling pathway. Predicted to be active in cytosol. Orthologous to human SEC14L1 (SEC14 like lipid binding 1). [provided by Alliance of Genome Resources, Jan 2025]
Annotation information: Annotation category: suggests misassembly; Annotation category: partial on reference assembly
Orthologs: all
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Genomic context

Location:: chromosome: Un

Exon count:: 7

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	Unplaced Scaffold	NW_008805391.1 (51894..63327, complement)
105	previous assembly	GRCz10 (GCF_000002035.5)	Unplaced Scaffold	NW_008805391.1 (51894..63327, complement)

NW_008805391.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables RIG-I binding	IBA Inferred from Biological aspect of Ancestor more info
enables molecular_function	ND No biological Data available more info

Process	Evidence Code	Pubs
involved_in negative regulation of RIG-I signaling pathway	IBA Inferred from Biological aspect of Ancestor more info

Component	Evidence Code	Pubs
is_active_in cytoplasm	IBA Inferred from Biological aspect of Ancestor more info
is_active_in cytosol	IBA Inferred from Biological aspect of Ancestor more info

General protein information

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Preferred Names: SEC14-like protein 1

Names: SEC14-like 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_201098.2 → NP_957392.1 SEC14-like protein 1

See identical proteins and their annotated locations for NP_957392.1

Status: PROVISIONAL

Source sequence(s)

BC044490

UniProtKB/TrEMBL

Q803G8

Related

ENSDARP00000132190.2, ENSDART00000172527.2

Conserved Domains (3) summary

smart01100
Location:238 → 283

CRAL_TRIO_N; CRAL/TRIO, N-terminal domain

pfam00650
Location:308 → 472

CRAL_TRIO; CRAL/TRIO domain

pfam04707
Location:17 → 173

PRELI; PRELI-like family