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    Fam151a family with sequence similarity 151, member A [ Rattus norvegicus (Norway rat) ]

    Gene ID: 313430, updated on 9-Dec-2024

    Summary

    Official Symbol
    Fam151aprovided by RGD
    Official Full Name
    family with sequence similarity 151, member Aprovided by RGD
    Primary source
    RGD:1359194
    See related
    EnsemblRapid:ENSRNOG00000007799 AllianceGenome:RGD:1359194
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Summary
    Predicted to be located in membrane. Predicted to be active in extracellular space. Human ortholog(s) of this gene implicated in colorectal adenocarcinoma. Orthologous to human FAM151A (family with sequence similarity 151 member A). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in Kidney (RPKM 1125.3), Heart (RPKM 99.1) and 2 other tissues See more
    Orthologs
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    Genomic context

    See Fam151a in Genome Data Viewer
    Location:
    5q34
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 5 NC_086023.1 (126743624..126756375)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 5 NC_051340.1 (121514804..121527555)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 5 NC_005104.4 (126334847..126347598)

    Chromosome 5 - NC_086023.1Genomic Context describing neighboring genes Neighboring gene tetratricopeptide repeat domain 4 Neighboring gene maestro heat-like repeat family member 7 Neighboring gene acyl-CoA thioesterase 11 Neighboring gene uncharacterized LOC134479025 Neighboring gene uncharacterized LOC134479026

    Genomic regions, transcripts, and products

    Expression

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001005558.1NP_001005558.1  protein FAM151A

      See identical proteins and their annotated locations for NP_001005558.1

      Status: PROVISIONAL

      Source sequence(s)
      BC081977
      UniProtKB/Swiss-Prot
      Q642A7
      UniProtKB/TrEMBL
      A6JYN9
      Related
      ENSRNOP00000010288.4, ENSRNOT00000010288.7
      Conserved Domains (1) summary
      pfam10223
      Location:70310
      DUF2181; Uncharacterized conserved protein (DUF2181)

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086023.1 Reference GRCr8

      Range
      126743624..126756375
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)