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    uncharacterized protein [ Saccharomyces cerevisiae S288C ]

    Gene ID: 854043, updated on 9-Dec-2024

    Summary

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    Official Full Name
    uncharacterized protein
    Primary source
    SGD:S000005467
    Locus tag
    YOL107W
    See related
    AllianceGenome:SGD:S000005467; FungiDB:YOL107W; VEuPathDB:YOL107W
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Saccharomyces cerevisiae S288C (strain: S288C)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Summary
    Predicted to be involved in retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum. Located in COPI-coated vesicle and Golgi apparatus. Orthologous to human TMEM115 (transmembrane protein 115). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    Location:
    chromosome: XV
    Exon count:
    1
    Sequence:
    Chromosome: XV; NC_001147.6 (112102..113130)

    Chromosome XV - NC_001147.6Genomic Context describing neighboring genes Neighboring gene tRNA-Gly Neighboring gene Ino4p Neighboring gene tRNA-Thr Neighboring gene Wsc3p

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_001147.6

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genomic disruption of six budding yeast genes gives one drastic example of phenotype strain-dependence. Bilsland E, et al. Yeast, 1998 May. PMID 9639312
    2. Bayesian modeling of the yeast SH3 domain interactome predicts spatiotemporal dynamics of endocytosis proteins. Tonikian R, et al. PLoS Biol, 2009 Oct. PMID 19841731, Free PMC Article
    3. Exploration of the function and organization of the yeast early secretory pathway through an epistatic miniarray profile. Schuldiner M, et al. Cell, 2005 Nov 4. PMID 16269340
    4. The nucleotide sequence of Saccharomyces cerevisiae chromosome XV. Dujon B, et al. Nature, 1997 May 29. PMID 9169874
    5. A lipid E-MAP identifies Ubx2 as a critical regulator of lipid saturation and lipid bilayer stress. Surma MA, et al. Mol Cell, 2013 Aug 22. PMID 23891562, Free PMC Article

    See all (18) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by SGD

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    involved_in retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in COPI-coated vesicle HDA PubMed 
    located_in Golgi apparatus HDA PubMed 
    is_active_in Golgi apparatus IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in Golgi apparatus IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in Golgi membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    NP_014534.1
    • hypothetical protein; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and colocalizes in a punctate pattern with the early golgi/COPI vesicles; YOL107W is not an essential protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001147.6 Reference assembly

      Range
      112102..113130
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001183361.1 → NP_014534.1  TPA: uncharacterized protein YOL107W [Saccharomyces cerevisiae S288C]

      See identical proteins and their annotated locations for NP_014534.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      D6W1W0, Q12239
      UniProtKB/TrEMBL
      A6ZNA3, B3LIV8, B5VRE8, C7GWS7, C8ZHK8, N1NWB3
      Conserved Domains (1) summary
      pfam08551
      Location:72 → 170
      DUF1751; Eukaryotic integral membrane protein (DUF1751)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q12239.1

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