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    Oaf out at first homolog [ Mus musculus (house mouse) ]

    Gene ID: 102644, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Oafprovided by MGI
    Official Full Name
    out at first homologprovided by MGI
    Primary source
    MGI:MGI:94852
    See related
    Ensembl:ENSMUSG00000032014 AllianceGenome:MGI:94852
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    D9Ucla1; D130038B21Rik
    Summary
    Orthologous to human OAF (out at first homolog). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Broad expression in liver adult (RPKM 103.5), placenta adult (RPKM 46.4) and 18 other tissues See more
    Orthologs
    human all
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    Genomic context

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    See Oaf in Genome Data Viewer
    Location:
    9 A5.1; 9 24.24 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 9 NC_000075.7 (43132575..43151113, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 9 NC_000075.6 (43221278..43239816, complement)

    Chromosome 9 - NC_000075.7Genomic Context describing neighboring genes Neighboring gene POU domain, class 2, transcription factor 3 Neighboring gene STARR-seq mESC enhancer starr_23926 Neighboring gene ribosomal protein L26, pseudogene 6 Neighboring gene CapStarr-seq enhancer MGSCv37_chr9:43050540-43050727 Neighboring gene VISTA enhancer mm1617 Neighboring gene RIKEN cDNA D630033O11 gene Neighboring gene STARR-seq mESC enhancer starr_23931 Neighboring gene tripartite motif-containing 29

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Assignment of the mouse ataxia-telangiectasia gene (Atm) to mouse chromosome 9. Xia Y, et al. Mamm Genome, 1996 Jul. PMID 8672141
    2. Molecular cloning and functional expression of murine JE (monocyte chemoattractant protein 1) and murine macrophage inflammatory protein 1alpha receptors: evidence for two closely linked C-C chemokine receptors on chromosome 9. Boring L, et al. J Biol Chem, 1996 Mar 29. PMID 8631787
    3. Linkage mapping of 40 randomly isolated liver cDNA clones in the mouse. Warden CH, et al. Genomics, 1993 Nov. PMID 8288233
    4. Genetic regulation of cholesterol homeostasis: chromosomal organization of candidate genes. Welch CL, et al. J Lipid Res, 1996 Jul. PMID 8827514
    5. Isolation of novel tissue-specific genes from cDNA libraries representing the individual tissue constituents of the gastrulating mouse embryo. Harrison SM, et al. Development, 1995 Aug. PMID 7671812

    See all (18) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Variation

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    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Gene trapped (1) 
    • Targeted (1) 

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    out at first protein homolog
    Names
    OAF homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_178644.3 → NP_848759.1  out at first protein homolog precursor

      See identical proteins and their annotated locations for NP_848759.1

      Status: PROVISIONAL

      Source sequence(s)
      AC173346
      Consensus CDS
      CCDS23091.1
      UniProtKB/Swiss-Prot
      Q3UD27, Q8QZR4
      Related
      ENSMUSP00000034512.6, ENSMUST00000034512.7
      Conserved Domains (1) summary
      pfam14941
      Location:43 → 280
      OAF; Transcriptional regulator, Out at first

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000075.7 Reference GRCm39 C57BL/6J

      Range
      43132575..43151113 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8QZR4.1 GenPept UniProtKB/Swiss-Prot:Q8QZR4

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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