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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_008941.4 → NP_032967.1 enteropeptidase isoform 1 precursor
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1).
- Source sequence(s)
-
AC112257, AC161815
- Consensus CDS
-
CCDS28280.1
- UniProtKB/Swiss-Prot
- P97435, Q148Y3
- Related
- ENSMUSP00000023566.5, ENSMUST00000023566.11
- Conserved Domains (11) summary
-
- cd06263
Location:392 → 547
- MAM; Meprin, A5 protein, and protein tyrosine phosphatase Mu (MAM) domain. MAM is an extracellular domain which mediates protein-protein interactions and is found in a diverse set of proteins, many of which are known to function in cell adhesion. Members ...
- smart00192
Location:228 → 261
- LDLa; Low-density lipoprotein receptor domain class A
- smart00020
Location:829 → 1064
- Tryp_SPc; Trypsin-like serine protease
- smart00200
Location:53 → 154
- SEA; Domain found in sea urchin sperm protein, enterokinase, agrin
- smart00202
Location:723 → 816
- SR; Scavenger receptor Cys-rich
- cd00112
Location:688 → 722
- LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
- cd00190
Location:830 → 1066
- Tryp_SPc; Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad ...
- pfam00431
Location:569 → 676
- CUB; CUB domain
- pfam00530
Location:728 → 819
- SRCR; Scavenger receptor cysteine-rich domain
- pfam00629
Location:392 → 549
- MAM; MAM domain, meprin/A5/mu
- cl00049
Location:270 → 376
- CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
-
NM_178855.5 → NP_849186.2 enteropeptidase isoform 2 precursor
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) lacks an alternate in-frame exon, compared to variant 1. The encoded isoform (2) is shorter than isoform 1.
- Source sequence(s)
-
AC112257, AC161815
- Consensus CDS
-
CCDS37380.1
- UniProtKB/TrEMBL
-
E9Q6Y6
- Related
- ENSMUSP00000052034.6, ENSMUST00000060402.6
- Conserved Domains (11) summary
-
- cd06263
Location:377 → 532
- MAM; Meprin, A5 protein, and protein tyrosine phosphatase Mu (MAM) domain. MAM is an extracellular domain which mediates protein-protein interactions and is found in a diverse set of proteins, many of which are known to function in cell adhesion. Members ...
- smart00192
Location:213 → 246
- LDLa; Low-density lipoprotein receptor domain class A
- smart00020
Location:814 → 1049
- Tryp_SPc; Trypsin-like serine protease
- smart00200
Location:53 → 154
- SEA; Domain found in sea urchin sperm protein, enterokinase, agrin
- smart00202
Location:708 → 801
- SR; Scavenger receptor Cys-rich
- cd00112
Location:673 → 707
- LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
- cd00190
Location:815 → 1051
- Tryp_SPc; Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad ...
- pfam00431
Location:554 → 661
- CUB; CUB domain
- pfam00530
Location:713 → 804
- SRCR; Scavenger receptor cysteine-rich domain
- pfam00629
Location:377 → 534
- MAM; MAM domain, meprin/A5/mu
- cl00049
Location:255 → 361
- CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000082.7 Reference GRCm39 C57BL/6J
- Range
-
78749896..78887988 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)