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    Gm10044 predicted gene 10044 [ Mus musculus (house mouse) ]

    Gene ID: 218695, updated on 17-Aug-2024

    Summary

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    Official Symbol
    Gm10044provided by MGI
    Official Full Name
    predicted gene 10044provided by MGI
    Primary source
    MGI:MGI:3641749
    See related
    AllianceGenome:MGI:3641749
    Gene type
    pseudo
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Expression
    Biased expression in testis adult (RPKM 15.2) and colon adult (RPKM 0.4) See more
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    Genomic context

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    See Gm10044 in Genome Data Viewer
    Location:
    14 A1; 14 4.55 cM
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 14 NC_000080.7 (14677999..14723324)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 14 NC_000080.6 (7751383..7793645, complement)

    Chromosome 14 - NC_000080.7Genomic Context describing neighboring genes Neighboring gene filamin, beta Neighboring gene STARR-seq mESC enhancer starr_35842 Neighboring gene STARR-positive B cell enhancer mm9_chr14:8650221-8650521 Neighboring gene STARR-seq mESC enhancer starr_35837 Neighboring gene CapStarr-seq enhancer MGSCv37_chr14:8606338-8606671 Neighboring gene predicted gene 8396 Neighboring gene CapStarr-seq enhancer MGSCv37_chr14:8598410-8598751 Neighboring gene STARR-seq mESC enhancer starr_35835 Neighboring gene predicted gene, 38418 Neighboring gene alpha-takusan pseudogene Neighboring gene predicted gene 10338

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

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    Related articles in PubMed

    1. Global discovery of erythroid long noncoding RNAs reveals novel regulators of red cell maturation. Alvarez-Dominguez JR, et al. Blood, 2014 Jan 23. PMID 24200680, Free PMC Article
    2. Widespread and dynamic translational control of red blood cell development. Alvarez-Dominguez JR, et al. Blood, 2017 Feb 2. PMID 27899360, Free PMC Article
    3. A high-resolution anatomical atlas of the transcriptome in the mouse embryo. Diez-Roux G, et al. PLoS Biol, 2011 Jan 18. PMID 21267068, Free PMC Article
    4. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
    5. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636

    See all (10) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Other Names

    • ankyrin repeat domain containing protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_175378.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC129222

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000080.7 Reference GRCm39 C57BL/6J

      Range
      14677999..14723324
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version

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