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    Stk35os1 serine/threonine kinase 35, opposite strand 1 [ Mus musculus (house mouse) ]

    Gene ID: 654409, updated on 2-Nov-2024

    Summary

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    Official Symbol
    Stk35os1provided by MGI
    Official Full Name
    serine/threonine kinase 35, opposite strand 1provided by MGI
    Primary source
    MGI:MGI:3606162
    See related
    AllianceGenome:MGI:3606162
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    4932416H05Rik
    Summary
    Is expressed in ovary follicle cell; spermatid; spermatocyte; and testis. [provided by Alliance of Genome Resources, Nov 2024]
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    Genomic context

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    See Stk35os1 in Genome Data Viewer
    Location:
    2 F1; 2 63.19 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (129640289..129643379, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (129798369..129801459, complement)

    Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_05677 Neighboring gene prodynorphin Neighboring gene STARR-seq mESC enhancer starr_05678 Neighboring gene STARR-seq mESC enhancer starr_05679 Neighboring gene peptidylprolyl isomerase A (Ppia) pseudogene 2_1620.1 Neighboring gene STARR-seq mESC enhancer starr_05680 Neighboring gene STARR-seq mESC enhancer starr_05681 Neighboring gene STARR-seq mESC enhancer starr_05682 Neighboring gene serine/threonine kinase 35 Neighboring gene STARR-seq mESC enhancer starr_05684 Neighboring gene predicted gene, 39933 Neighboring gene STARR-seq mESC enhancer starr_05686 Neighboring gene transglutaminase 3, E polypeptide Neighboring gene predicted gene, 52561

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The STK35 locus contributes to normal gametogenesis and encodes a lncRNA responsive to oxidative stress. Miyamoto Y, et al. Biol Open, 2018 Aug 6. PMID 29970477, Free PMC Article
    2. Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Hansen GM, et al. Genome Res, 2008 Oct. PMID 18799693, Free PMC Article
    3. Normalization and subtraction: two approaches to facilitate gene discovery. Bonaldo MF, et al. Genome Res, 1996 Sep. PMID 8889548
    4. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
    5. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636

    See all (10) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_029452.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AL808137

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000068.8 Reference GRCm39 C57BL/6J

      Range
      129640289..129643379 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version

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