U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Spx spexin hormone [ Mus musculus (house mouse) ]

    Gene ID: 319552, updated on 27-Nov-2024

    Summary

    Official Symbol
    Spxprovided by MGI
    Official Full Name
    spexin hormoneprovided by MGI
    Primary source
    MGI:MGI:2442262
    See related
    Ensembl:ENSMUSG00000071112 AllianceGenome:MGI:2442262
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Npq; B230216G23Rik
    Summary
    Predicted to enable neuropeptide hormone activity; type 2 galanin receptor binding activity; and type 3 galanin receptor binding activity. Involved in long-chain fatty acid import into cell and negative regulation of appetite. Predicted to be located in dense core granule. Predicted to be active in cytoplasm and extracellular space. Is expressed in esophagus and stomach fundus submucosa. Orthologous to human SPX (spexin hormone). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Broad expression in CNS E14 (RPKM 1.9), CNS E18 (RPKM 1.8) and 19 other tissues See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Spx in Genome Data Viewer
    Location:
    6 G2; 6 74.03 cM
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 6 NC_000072.7 (142359114..142365466)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 6 NC_000072.6 (142413388..142419740)

    Chromosome 6 - NC_000072.7Genomic Context describing neighboring genes Neighboring gene pyridine nucleotide-disulphide oxidoreductase domain 1 Neighboring gene RecQ protein-like Neighboring gene STARR-positive B cell enhancer ABC_E1716 Neighboring gene golgi transport 1B Neighboring gene glycogen synthase 2 Neighboring gene CapStarr-seq enhancer MGSCv37_chr6:142438685-142438868 Neighboring gene STARR-seq mESC enhancer starr_17706 Neighboring gene lactate dehydrogenase B

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (3) 

    General gene information

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables neuropeptide hormone activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables neuropeptide hormone activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables neuropeptide hormone activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    enables type 2 galanin receptor binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables type 2 galanin receptor binding ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables type 3 galanin receptor binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables type 3 galanin receptor binding ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    Process Evidence Code Pubs
    involved_in long-chain fatty acid import into cell IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in long-chain fatty acid import into cell ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in negative regulation of appetite IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in negative regulation of appetite ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in negative regulation of heart rate ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in negative regulation of heart rate ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in negative regulation of renal sodium excretion ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in negative regulation of renal sodium excretion ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in positive regulation of gastro-intestinal system smooth muscle contraction IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in positive regulation of gastro-intestinal system smooth muscle contraction ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of gastro-intestinal system smooth muscle contraction ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    involved_in positive regulation of systemic arterial blood pressure ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of systemic arterial blood pressure ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in positive regulation of transcription by RNA polymerase II ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of transcription by RNA polymerase II ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in regulation of sensory perception of pain ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in regulation of sensory perception of pain ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in signal transduction IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in cytoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    located_in dense core granule ISO
    Inferred from Sequence Orthology
    more info
     
    located_in dense core granule ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    is_active_in extracellular space IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in extracellular space ISO
    Inferred from Sequence Orthology
    more info
     
    located_in extracellular space ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    located_in transport vesicle IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    spexin
    Names
    neuropeptide Q

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001242345.1NP_001229274.1  spexin isoform 1 precursor

      Status: VALIDATED

      Source sequence(s)
      AC142413, AK043509, AK045625, BG092156
      Consensus CDS
      CCDS85181.1
      UniProtKB/TrEMBL
      A0A1C7CYU9
      Related
      ENSMUSP00000118062.5, ENSMUST00000126521.9
      Conserved Domains (1) summary
      pfam15171
      Location:27118
      Spexin; Neuropeptide secretory protein family, NPQ, spexin
    2. NM_001369015.1NP_001355944.1  spexin isoform 2 precursor

      Status: VALIDATED

      Source sequence(s)
      AC142413
      Consensus CDS
      CCDS90134.1
      UniProtKB/Swiss-Prot
      D3Z752
      Related
      ENSMUSP00000147302.2, ENSMUST00000211094.2
      Conserved Domains (1) summary
      pfam15171
      Location:27116
      Spexin; Neuropeptide secretory protein family, NPQ, spexin

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000072.7 Reference GRCm39 C57BL/6J

      Range
      142359114..142365466
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)