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    Myo1e myosin IE [ Mus musculus (house mouse) ]

    Gene ID: 71602, updated on 9-Dec-2024

    Summary

    Official Symbol
    Myo1eprovided by MGI
    Official Full Name
    myosin IEprovided by MGI
    Primary source
    MGI:MGI:106621
    See related
    Ensembl:ENSMUSG00000032220 AllianceGenome:MGI:106621
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    myr 3; myosin-1e; 2310020N23Rik; 9130023P14Rik
    Summary
    Predicted to enable several functions, including ATP hydrolysis activity; actin filament binding activity; and calmodulin binding activity. Involved in glomerular basement membrane development; glomerular filtration; and podocyte development. Acts upstream of or within several processes, including platelet-derived growth factor receptor signaling pathway; post-embryonic hemopoiesis; and vasculogenesis. Located in adherens junction; brush border; and cytoplasm. Human ortholog(s) of this gene implicated in focal segmental glomerulosclerosis 6. Orthologous to human MYO1E (myosin IE). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Ubiquitous expression in colon adult (RPKM 9.1), lung adult (RPKM 7.2) and 28 other tissues See more
    Orthologs
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    Genomic context

    See Myo1e in Genome Data Viewer
    Location:
    9 D; 9 39.41 cM
    Exon count:
    29
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 9 NC_000075.7 (70114632..70307349)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 9 NC_000075.6 (70207350..70400067)

    Chromosome 9 - NC_000075.7Genomic Context describing neighboring genes Neighboring gene family with sequence similarity 81, member A Neighboring gene predicted gene, 39476 Neighboring gene predicted gene, 24257 Neighboring gene STARR-positive B cell enhancer ABC_E1389 Neighboring gene predicted gene, 26849 Neighboring gene STARR-positive B cell enhancer ABC_E5083 Neighboring gene STARR-positive B cell enhancer mm9_chr9:70092007-70092308 Neighboring gene STARR-seq mESC enhancer starr_24540 Neighboring gene STARR-seq mESC enhancer starr_24541 Neighboring gene STARR-seq mESC enhancer starr_24543 Neighboring gene STARR-positive B cell enhancer ABC_E9770 Neighboring gene predicted gene, 40531 Neighboring gene predicted gene, 18017 Neighboring gene STARR-seq mESC enhancer starr_24550 Neighboring gene STARR-positive B cell enhancer ABC_E2901 Neighboring gene microRNA 5626 Neighboring gene cyclin B2

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables ATP hydrolysis activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables ATP hydrolysis activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables actin filament binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables actin filament binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables actin filament binding ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables calmodulin binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables calmodulin binding ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables cytoskeletal motor activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables microfilament motor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables phosphatidylinositol binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables phosphatidylinositol binding ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables protein-containing complex binding ISO
    Inferred from Sequence Orthology
    more info
     
    Process Evidence Code Pubs
    involved_in actin filament organization IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in endocytosis IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in endocytosis ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in endocytosis ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    acts_upstream_of_or_within excretion IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in glomerular basement membrane development IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in glomerular filtration IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in glomerulus development IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    acts_upstream_of_or_within hemopoiesis IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within in utero embryonic development IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within kidney development IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within platelet-derived growth factor receptor signaling pathway IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in podocyte development IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within post-embryonic hemopoiesis IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within vasculogenesis IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    is_active_in actin cytoskeleton IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in adherens junction IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in brush border IDA
    Inferred from Direct Assay
    more info
    PubMed 
    colocalizes_with clathrin-coated endocytic vesicle ISO
    Inferred from Sequence Orthology
    more info
     
    colocalizes_with clathrin-coated endocytic vesicle ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    located_in cuticular plate IEA
    Inferred from Electronic Annotation
    more info
     
    located_in cuticular plate ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in cytoplasm IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in cytoskeleton ISO
    Inferred from Sequence Orthology
    more info
     
    located_in cytoskeleton ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    is_active_in microvillus IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of myosin complex IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of protein-containing complex ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    unconventional myosin-Ie
    Names
    molecular motor
    unconventional myosin 1E

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_181072.3NP_851417.2  unconventional myosin-Ie

      See identical proteins and their annotated locations for NP_851417.2

      Status: VALIDATED

      Source sequence(s)
      AA250515, AK018649, AK029145, BB220783, BG076620, BG086565, BY761514, CAAA01204697, CX242330
      Consensus CDS
      CCDS40680.1
      UniProtKB/Swiss-Prot
      E9Q634, Q80X36, Q91ZI4
      Related
      ENSMUSP00000034745.8, ENSMUST00000034745.9
      Conserved Domains (4) summary
      cd11827
      Location:10551106
      SH3_MyoIe_If_like; Src homology 3 domain of Myosins Ie, If, and similar proteins
      smart00242
      Location:14692
      MYSc; Myosin. Large ATPases
      cd01378
      Location:33679
      MYSc_Myo1; class I myosin, motor domain
      pfam06017
      Location:719902
      Myosin_TH1; Unconventional myosin tail, actin- and lipid-binding

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000075.7 Reference GRCm39 C57BL/6J

      Range
      70114632..70307349
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_011242814.1XP_011241116.1  unconventional myosin-Ie isoform X1

      Conserved Domains (3) summary
      cd11827
      Location:10671118
      SH3_MyoIe_If_like; Src homology 3 domain of Myosins Ie, If, and similar proteins
      cd01378
      Location:45691
      MYSc_Myo1; class I myosin, motor domain
      pfam06017
      Location:731932
      Myosin_TH1; Unconventional myosin tail, actin- and lipid-binding

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_025612.1: Suppressed sequence

      Description
      NM_025612.1: This RefSeq record was removed by NCBI staff. Contact [email protected] for further information.