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    AU015228 expressed sequence AU015228 [ Mus musculus (house mouse) ]

    Gene ID: 99169, updated on 27-Nov-2024

    Summary

    Official Symbol
    AU015228provided by MGI
    Official Full Name
    expressed sequence AU015228provided by MGI
    Primary source
    MGI:MGI:2139152
    See related
    AllianceGenome:MGI:2139152
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
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    Genomic context

    See AU015228 in Genome Data Viewer
    Location:
    2 F1; 2 63.19 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (129942314..129945295)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (130100394..130103375)

    Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene predicted gene, 22424 Neighboring gene predicted gene, 24665 Neighboring gene transglutaminase 6 Neighboring gene STARR-positive B cell enhancer ABC_E2047 Neighboring gene small nuclear ribonucleoprotein B

    Genomic regions, transcripts, and products

    General protein information

    Preferred Names
    General transcription factor IIE subunit 1-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001033197.2NP_001028369.1  General transcription factor IIE subunit 1-like

      See identical proteins and their annotated locations for NP_001028369.1

      Status: PROVISIONAL

      Source sequence(s)
      AK139778
      UniProtKB/TrEMBL
      B9EKG9, Q3TQQ1
      Conserved Domains (4) summary
      smart00531
      Location:28174
      TFIIE; Transcription initiation factor IIE
      pfam02002
      Location:16123
      TFIIE_alpha; TFIIE alpha subunit
      pfam08271
      Location:127164
      TF_Zn_Ribbon; TFIIB zinc-binding
      pfam11521
      Location:393439
      TFIIE-A_C; C-terminal general transcription factor TFIIE alpha

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000068.8 Reference GRCm39 C57BL/6J

      Range
      129942314..129945295
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)