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    CG31301 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 41865, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG31301provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0051301
    Locus tag
    Dmel_CG31301
    See related
    AllianceGenome:FB:FBgn0051301
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG12258; Dmel\CG31301
    Summary
    Predicted to enable nucleic acid binding activity. Predicted to be active in nucleolus and nucleoplasm. Is expressed in organism. Orthologous to human NKRF (NFKB repressing factor). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG31301 in Genome Data Viewer
    Location:
    88F1-88F1; 3-57 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (15346205..15348012)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (11171927..11173734)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene N-acetylglucosamine kinase Neighboring gene Seryl-tRNA synthetase, mitochondrial Neighboring gene Surfeit 4 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene TRAPP subunit 33 Neighboring gene Transmembrane O-mannosyltransferase targeting cadherins 4 Neighboring gene Autophagy-related 4b

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Proteomics identification of Drosophila small interfering RNA-associated factors. Gerbasi VR, et al. Mol Cell Proteomics, 2010 Sep. PMID 20472918, Free PMC Article
    2. An endogenous small interfering RNA pathway in Drosophila. Czech B, et al. Nature, 2008 Jun 5. PMID 18463631, Free PMC Article
    3. Automated identification of putative methyltransferases from genomic open reading frames. Katz JE, et al. Mol Cell Proteomics, 2003 Aug. PMID 12872006
    4. A gain-of-function screen identifying genes required for vein formation in the Drosophila melanogaster wing. Molnar C, et al. Genetics, 2006 Nov. PMID 16980395, Free PMC Article
    5. Comparative genomics and evolution of proteins involved in RNA metabolism. Anantharaman V, et al. Nucleic Acids Res, 2002 Apr 1. PMID 11917006, Free PMC Article

    See all (29) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables nucleic acid binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    is_active_in nucleolus IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    is_active_in nucleoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG31301-PA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      15346205..15348012
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_142192.4 → NP_650449.1  uncharacterized protein Dmel_CG31301 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_650449.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q960V5, Q9VF83
      Related
      FBpp0082543
      Conserved Domains (3) summary
      cd02640
      Location:331 → 390
      R3H_NRF; R3H domain of the NF-kappaB-repression factor (NRF). NRF is a nuclear inhibitor of NF-kappaB proteins that can silence the IFNbeta promoter via binding to a negative regulatory element (NRE). Beside R3H NRF also contains a G-patch domain. The name of the ...
      smart00443
      Location:280 → 323
      G_patch; glycine rich nucleic binding domain
      pfam11952
      Location:34 → 118
      XTBD; XRN-Two Binding Domain, XTBD
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9VF83 Q9VF83

    Gene LinkOut

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