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    CG9776 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 40546, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG9776provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0027866
    Locus tag
    Dmel_CG9776
    See related
    AllianceGenome:FB:FBgn0027866
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    BcDNA:LD19168; Dmel\CG9776
    Summary
    Predicted to be involved in negative regulation of DNA-templated transcription and positive regulation of DNA-templated transcription. Predicted to be active in nucleoplasm. Orthologous to human ZNF318 (zinc finger protein 318). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG9776 in Genome Data Viewer
    Location:
    82A3-82A4; 3-47.1 cM
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (4327814..4334071, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (153536..159793, complement)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene Suv3 helicase Neighboring gene Synaptotagmin 14 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene S-phase kinase-associated protein 2 Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Transposition of the vertebrate Tol2 transposable element in Drosophila melanogaster. Urasaki A, et al. Gene, 2008 Dec 1. PMID 18775483
    2. TFOFinder: Python program for identifying purine-only double-stranded stretches in the predicted secondary structure(s) of RNA targets. Neugroschl A, et al. PLoS Comput Biol, 2023 Aug. PMID 37624852, Free PMC Article
    3. A genomic response to the yeast transcription factor GAL4 in Drosophila. Liu Y, et al. Fly (Austin), 2008 Mar-Apr. PMID 18820459, Free PMC Article
    4. spenito is required for sex determination in Drosophila melanogaster. Yan D, et al. Proc Natl Acad Sci U S A, 2015 Sep 15. PMID 26324914, Free PMC Article
    5. A comprehensive Drosophila resource to identify key functional interactions between SARS-CoV-2 factors and host proteins. Guichard A, et al. Cell Rep, 2023 Aug 29. PMID 37480566, Free PMC Article

    See all (37) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    mobile_element

    • Loc: c4330663-4330388 mobile_element_type = transposon:INE-1{}3652

    Gene Ontology Provided by FlyBase

    Process Evidence Code Pubs
    involved_in negative regulation of DNA-templated transcription IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in positive regulation of DNA-templated transcription IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    is_active_in nucleoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG9776-PA
    CG9776-PB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      4327814..4334071 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_141198.4 → NP_649455.1  uncharacterized protein Dmel_CG9776, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_649455.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q7JRP8, Q8I092, Q9V468
      Related
      FBpp0078595
      Conserved Domains (2) summary
      smart00451
      Location:546 → 577
      ZnF_U1; U1-like zinc finger
      cl21462
      Location:289 → 322
      bZIP; Basic leucine zipper (bZIP) domain of bZIP transcription factors: a DNA-binding and dimerization domain

    2. NM_164339.4 → NP_730813.3  uncharacterized protein Dmel_CG9776, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_730813.3

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9V468
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9V468.1 Q9V468

    Gene LinkOut

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