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    RpS10a Ribosomal protein S10a [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 43321, updated on 9-Dec-2024

    Summary

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    Official Symbol
    RpS10aprovided by FlyBase
    Official Full Name
    Ribosomal protein S10aprovided by FlyBase
    Primary source
    FLYBASE:FBgn0027494
    Locus tag
    Dmel_CG12275
    See related
    AllianceGenome:FB:FBgn0027494
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    BcDNA:LD32148; CG12275; Dmel\CG12275; RpS10; S10; S10e
    Summary
    A structural constituent of ribosome. Predicted to be involved in cytoplasmic translation. Located in cytosolic ribosome. Human ortholog(s) of this gene implicated in Diamond-Blackfan anemia 9. Orthologous to human RPS10 (ribosomal protein S10) and RPS10P5 (ribosomal protein S10 pseudogene 5). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See RpS10a in Genome Data Viewer
    Location:
    98A14-98A14; 3-94 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (27652760..27653363)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (23478482..23479085)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene Mig-2-like Neighboring gene mir-1001 stem loop Neighboring gene tau Neighboring gene Myosin alkali light chain 1 Neighboring gene uncoordinated 80

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The role of PAR-1 in regulating the polarised microtubule cytoskeleton in the Drosophila follicular epithelium. Doerflinger H, et al. Development, 2003 Sep. PMID 12874119
    2. Genetic interaction screens identify a role for hedgehog signaling in Drosophila border cell migration. Geisbrecht ER, et al. Dev Dyn, 2013 May. PMID 23335293, Free PMC Article
    3. Ribosome heterogeneity in Drosophila melanogaster gonads through paralog-switching. Hopes T, et al. Nucleic Acids Res, 2022 Feb 28. PMID 34283226, Free PMC Article
    4. Genome-wide identification of Grainy head targets in Drosophila reveals regulatory interactions with the POU domain transcription factor Vvl. Yao L, et al. Development, 2017 Sep 1. PMID 28760809, Free PMC Article
    5. Single-cell RNA sequencing identifies eggplant as a regulator of germ cell development in Drosophila. Sun Z, et al. EMBO Rep, 2023 Oct 9. PMID 37603128, Free PMC Article

    See all (40) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables RNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables structural constituent of ribosome IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables structural constituent of ribosome IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables structural constituent of ribosome TAS
    Traceable Author Statement
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cytoplasmic translation IC
    Inferred by Curator
    more info
    		 PubMed 
    involved_in cytoplasmic translation TAS
    Traceable Author Statement
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosolic ribosome IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    part_of cytosolic small ribosomal subunit IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    part_of cytosolic small ribosomal subunit TAS
    Traceable Author Statement
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ribosomal protein S10a
    Names
    CG12275-PA
    RpS10a-PA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      27652760..27653363
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_143319.4 → NP_651576.1  ribosomal protein S10a [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_651576.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9VB14, Q9Y0Y3
      Related
      FBpp0084564
      Conserved Domains (1) summary
      pfam03501
      Location:3 → 95
      S10_plectin; Plectin/S10 domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9VB14.1 Q9VB14

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