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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001347600.2 → NP_001334529.1 F-box/LRR-repeat protein 3 isoform 2
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) differs in the 5' UTR and uses an alternate in-frame splice site in the 5' coding region compared to variant 1. The encoded isoform (2) has the same N- and C-termini, but is shorter than isoform 1.
- Source sequence(s)
-
AC102815
- Consensus CDS
-
CCDS84159.1
- UniProtKB/TrEMBL
-
Q3TJJ7
- Conserved Domains (2) summary
-
- sd00034
Location:126 → 151
- LRR_AMN1; leucine-rich repeat [structural motif]
- pfam12937
Location:36 → 69
- F-box-like
-
NM_001347601.2 → NP_001334530.1 F-box/LRR-repeat protein 3 isoform 2
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) differs in the 5' UTR and uses an alternate in-frame splice site in the 5' coding region compared to variant 1. The encoded isoform (2) has the same N- and C-termini, but is shorter than isoform 1.
- Source sequence(s)
-
AC102815
- Consensus CDS
-
CCDS84159.1
- UniProtKB/TrEMBL
-
Q3TJJ7
- Related
- ENSMUSP00000115843.2, ENSMUST00000132004.8
- Conserved Domains (2) summary
-
- sd00034
Location:126 → 151
- LRR_AMN1; leucine-rich repeat [structural motif]
- pfam12937
Location:36 → 69
- F-box-like
-
NM_001360341.2 → NP_001347270.1 F-box/LRR-repeat protein 3 isoform 1
Status: VALIDATED
- Source sequence(s)
-
AC102815
- Consensus CDS
-
CCDS27315.1
- UniProtKB/Swiss-Prot
- Q80V32, Q8C4V4, Q8K1W0, Q9QXW1
- UniProtKB/TrEMBL
- Q3TJJ7, Q5PRF6
- Related
- ENSMUSP00000116044.2, ENSMUST00000145693.8
- Conserved Domains (2) summary
-
- sd00034
Location:174 → 199
- LRR_AMN1; leucine-rich repeat [structural motif]
- pfam12937
Location:36 → 77
- F-box-like; F-box-like
-
NM_001360342.2 → NP_001347271.1 F-box/LRR-repeat protein 3 isoform 1
Status: VALIDATED
- Source sequence(s)
-
AC102815
- Consensus CDS
-
CCDS27315.1
- UniProtKB/Swiss-Prot
- Q80V32, Q8C4V4, Q8K1W0, Q9QXW1
- UniProtKB/TrEMBL
- Q3TJJ7, Q5PRF6
- Conserved Domains (2) summary
-
- sd00034
Location:174 → 199
- LRR_AMN1; leucine-rich repeat [structural motif]
- pfam12937
Location:36 → 77
- F-box-like; F-box-like
-
NM_001424673.1 → NP_001411602.1 F-box/LRR-repeat protein 3 isoform 1
Status: VALIDATED
- Source sequence(s)
-
AC102815
- UniProtKB/TrEMBL
-
Q3TJJ7
-
NM_001424674.1 → NP_001411603.1 F-box/LRR-repeat protein 3 isoform 3
Status: VALIDATED
- Source sequence(s)
-
AC102815
- UniProtKB/TrEMBL
-
Q8BNS3
-
NM_001424675.1 → NP_001411604.1 F-box/LRR-repeat protein 3 isoform 3
Status: VALIDATED
- Source sequence(s)
-
AC102815
- UniProtKB/TrEMBL
-
Q8BNS3
-
NM_015822.4 → NP_056637.1 F-box/LRR-repeat protein 3 isoform 1
See identical proteins and their annotated locations for NP_056637.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) represents the longest transcript and encodes the longest isoform (1).
- Source sequence(s)
-
AC102815
- Consensus CDS
-
CCDS27315.1
- UniProtKB/Swiss-Prot
- Q80V32, Q8C4V4, Q8K1W0, Q9QXW1
- UniProtKB/TrEMBL
- Q3TJJ7, Q5PRF6
- Related
- ENSMUSP00000022720.9, ENSMUST00000022720.15
- Conserved Domains (2) summary
-
- sd00034
Location:174 → 199
- LRR_AMN1; leucine-rich repeat [structural motif]
- pfam12937
Location:36 → 77
- F-box-like; F-box-like
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000080.7 Reference GRCm39 C57BL/6J
- Range
-
103318470..103337016 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)