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    Rsrc2 arginine and serine rich coiled-coil 2 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 360807, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Rsrc2provided by RGD
    Official Full Name
    arginine and serine rich coiled-coil 2provided by RGD
    Primary source
    RGD:1564882
    See related
    EnsemblRapid:ENSRNOG00000001238 AllianceGenome:RGD:1564882
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Summary
    Orthologous to human RSRC2 (arginine and serine rich coiled-coil 2). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in Thymus (RPKM 331.7), Spleen (RPKM 229.6) and 9 other tissues See more
    Orthologs
    human mouse all
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    Genomic context

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    See Rsrc2 in Genome Data Viewer
    Location:
    12q16
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 12 NC_086030.1 (38500709..38520715)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 12 NC_051347.1 (32839840..32859820)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 12 NC_005111.4 (38274290..38294294)

    Chromosome 12 - NC_086030.1Genomic Context describing neighboring genes Neighboring gene hydroxycarboxylic acid receptor 2 Neighboring gene kinetochore associated 1 Neighboring gene zinc finger CCHC-type containing 8 Neighboring gene protein S100-A11-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Bibliography

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    Related articles in PubMed

    1. The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts. Baltz AG, et al. Mol Cell, 2012 Jun 8. PMID 22681889
    2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    arginine/serine-rich coiled-coil protein 2
    Names
    arginine/serine-rich coiled-coil 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001014128.2 → NP_001014150.1  arginine/serine-rich coiled-coil protein 2 isoform 1

      See identical proteins and their annotated locations for NP_001014150.1

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000012
      UniProtKB/Swiss-Prot
      Q5PQR4
      Related
      ENSRNOP00000112419.1, ENSRNOT00000173736.1
      Conserved Domains (1) summary
      pfam15477
      Location:296 → 365
      SMAP; Small acidic protein family

    2. NM_001401170.1 → NP_001388099.1  arginine/serine-rich coiled-coil protein 2 isoform 2

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000012
      Related
      ENSRNOP00000054602.4, ENSRNOT00000057788.5
      Conserved Domains (1) summary
      pfam15477
      Location:355 → 424
      SMAP; Small acidic protein family

    3. NM_001401171.1 → NP_001388100.1  arginine/serine-rich coiled-coil protein 2 isoform 3

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000012
      Conserved Domains (1) summary
      pfam15477
      Location:354 → 423
      SMAP; Small acidic protein family

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086030.1 Reference GRCr8

      Range
      38500709..38520715
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006249341.4 → XP_006249403.1  arginine/serine-rich coiled-coil protein 2 isoform X1

      See identical proteins and their annotated locations for XP_006249403.1

      Related
      ENSRNOP00000070981.2, ENSRNOT00000087905.3
      Conserved Domains (1) summary
      pfam15477
      Location:295 → 364
      SMAP; Small acidic protein family

    RNA

    1. XR_010056406.1 RNA Sequence

    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q5PQR4.1 GenPept UniProtKB/Swiss-Prot:Q5PQR4

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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