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    CG34325 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 32656, updated on 27-Dec-2024

    Summary

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    Official Symbol
    CG34325provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0085354
    Locus tag
    Dmel_CG34325
    See related
    AllianceGenome:FB:FBgn0085354
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG18358; Dmel\CG34325
    Summary
    Predicted to enable transcription coregulator activity. Predicted to be active in Z disc and nucleus. Orthologous to human FHL2 (four and a half LIM domains 2) and FHL5 (four and a half LIM domains 5). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG34325 in Genome Data Viewer
    Location:
    15A3-15A3; 1-55 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (16714449..16721411, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (16608482..16615444, complement)

    Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene gone early Neighboring gene TweedleX Neighboring gene TweedleY

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The Roles of the LIM Domain Proteins in Drosophila Cardiac and Hematopoietic Morphogenesis. She M, et al. Front Cardiovasc Med, 2021. PMID 33681304, Free PMC Article
    2. Variant functional assessment in Drosophila by overexpression: what can we learn? Her Y, et al. Genome, 2024 Jun 1. PMID 38412472
    3. Genome-Wide Association Study of Circadian Behavior in Drosophila melanogaster. Harbison ST, et al. Behav Genet, 2019 Jan. PMID 30341464, Free PMC Article
    4. A single-cell atlas and lineage analysis of the adult Drosophila ovary. Rust K, et al. Nat Commun, 2020 Nov 6. PMID 33159074, Free PMC Article
    5. Nociceptor-Enriched Genes Required for Normal Thermal Nociception. Honjo K, et al. Cell Rep, 2016 Jul 12. PMID 27346357, Free PMC Article

    See all (27) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables transcription coregulator activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    is_active_in Z disc IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG34325-PA
    CG34325-PB
    CG34325-PC

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004354.4 Reference assembly

      Range
      16714449..16721411 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001298419.1 → NP_001285348.1  uncharacterized protein Dmel_CG34325, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001285348.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      X2JFG6
      Conserved Domains (1) summary
      cl02475
      Location:52 → 100
      LIM; LIM is a small protein-protein interaction domain, containing two zinc fingers

    2. NM_001103533.2 → NP_001097003.1  uncharacterized protein Dmel_CG34325, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001097003.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VXC1
      Conserved Domains (1) summary
      cl02475
      Location:67 → 119
      LIM; LIM is a small protein-protein interaction domain, containing two zinc fingers

    3. NM_001298418.1 → NP_001285347.1  uncharacterized protein Dmel_CG34325, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001285347.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VXC1
      Conserved Domains (1) summary
      cl02475
      Location:67 → 119
      LIM; LIM is a small protein-protein interaction domain, containing two zinc fingers
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9VXC1 Q9VXC1
    X2JFG6 X2JFG6

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