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    CG12341 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 36137, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG12341provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0033550
    Locus tag
    Dmel_CG12341
    See related
    AllianceGenome:FB:FBgn0033550
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    BcDNA:SD17342; Dmel\CG12341
    Summary
    Is expressed in organism. Orthologous to several human genes including TMEM170A (transmembrane protein 170A). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG12341 in Genome Data Viewer
    Location:
    47C1-47C1; 2-63 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (10812157..10813310, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (6699662..6700815, complement)

    Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene windei Neighboring gene uncharacterized protein Neighboring gene Nop10 ribonucleoprotein Neighboring gene Methyl methanesulfonate sensitivity 4 Neighboring gene uncharacterized protein Neighboring gene diego

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Synthetic lethality of Drosophila in the absence of the MUS81 endonuclease and the DmBlm helicase is associated with elevated apoptosis. Trowbridge K, et al. Genetics, 2007 Aug. PMID 17603121, Free PMC Article
    2. Loss of the endoplasmic reticulum protein Tmem208 affects cell polarity, development, and viability. Dutta D, et al. Proc Natl Acad Sci U S A, 2024 Feb 27. PMID 38381787, Free PMC Article
    3. Gepoclu: a software tool for identifying and analyzing gene positional clusters in large-scale gene expression analysis. Dottorini T, et al. BMC Bioinformatics, 2011 Jan 26. PMID 21269436, Free PMC Article
    4. Comparative Genomic Analyses Provide New Insights into the Evolutionary Dynamics of Heterochromatin in Drosophila. Caizzi R, et al. PLoS Genet, 2016 Aug. PMID 27513559, Free PMC Article
    5. Putative synaptic genes defined from a Drosophila whole body developmental transcriptome by a machine learning approach. Pazos Obregón F, et al. BMC Genomics, 2015 Sep 15. PMID 26370122, Free PMC Article

    See all (27) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG12341-PA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033778.4 Reference assembly

      Range
      10812157..10813310 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_136768.2 → NP_610612.1  uncharacterized protein Dmel_CG12341 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_610612.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q7JV61
      Related
      FBpp0087346
      Conserved Domains (1) summary
      pfam10190
      Location:24 → 128
      Tmemb_170; Putative transmembrane protein 170
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q7JV61 Q7JV61

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