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    CG30460 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 36924, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG30460provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0050460
    Locus tag
    Dmel_CG30460
    See related
    AllianceGenome:FB:FBgn0050460
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    anon-WO0140519.237; CG15607; CG15608; Dmel\CG30460
    Summary
    Is expressed in several structures, including anterior endoderm; anterior endoderm anlage; embryonic/larval midgut primordium; larval muscle system; and larval somatic muscle cell. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG30460 in Genome Data Viewer
    Location:
    53F4-53F6; 2-81 cM
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (17065971..17087633, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (12953476..12975138, complement)

    Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene fat-spondin Neighboring gene teflon Neighboring gene uncharacterized protein Neighboring gene Mov10 RISC complex RNA helicase Neighboring gene snoRNA:Orphan CD box 17 Neighboring gene Sphingosine-1-phosphate lyase Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Reduced Function of the Glutathione S-Transferase S1 Suppresses Behavioral Hyperexcitability in Drosophila Expressing Mutant Voltage-Gated Sodium Channels. Chen HL, et al. G3 (Bethesda), 2020 Apr 9. PMID 32054635, Free PMC Article
    2. B.2.16 is a non-lethal modifier of the Dark(82) mosaic eye phenotype in Drosophila melanogaster. Vrailas-Mortimer AD, et al. MicroPubl Biol, 2021 Jan 18. PMID 33474526, Free PMC Article
    3. The Drosophila Translational Control Element (TCE) is required for high-level transcription of many genes that are specifically expressed in testes. Katzenberger RJ, et al. PLoS One, 2012. PMID 22984601, Free PMC Article
    4. Mating-responsive genes in reproductive tissues of female Drosophila melanogaster. Mack PD, et al. Proc Natl Acad Sci U S A, 2006 Jul 5. PMID 16798875, Free PMC Article
    5. The Drosophila surface glia transcriptome: evolutionary conserved blood-brain barrier processes. DeSalvo MK, et al. Front Neurosci, 2014. PMID 25426014, Free PMC Article

    See all (30) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG30460-PA
    CG30460-PB
    CG30460-PC
    CG30460-PD
    CG30460-PE
    CG30460-PF
    CG30460-PG
    CG30460-PH
    CG30460-PI

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033778.4 Reference assembly

      Range
      17065971..17087633 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001103885.4 → NP_001097355.1  uncharacterized protein Dmel_CG30460, isoform E [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001097355.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A8DYH3
      Conserved Domains (1) summary
      pfam13913
      Location:93 → 117
      zf-C2HC_2; zinc-finger of a C2HC-type

    2. NM_001144213.3 → NP_001137685.1  uncharacterized protein Dmel_CG30460, isoform F [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001137685.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      B7YZI6
      Conserved Domains (1) summary
      pfam13913
      Location:181 → 205
      zf-C2HC_2; zinc-finger of a C2HC-type

    3. NM_001144214.3 → NP_001137686.1  uncharacterized protein Dmel_CG30460, isoform G [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001137686.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      B7YZI7, Q6NQX3
      Conserved Domains (1) summary
      pfam13913
      Location:250 → 274
      zf-C2HC_2; zinc-finger of a C2HC-type

    4. NM_137342.4 → NP_611186.2  uncharacterized protein Dmel_CG30460, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_611186.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A1ZAP8
      Related
      FBpp0086161
      Conserved Domains (1) summary
      pfam13913
      Location:250 → 274
      zf-C2HC_2; zinc-finger of a C2HC-type

    5. NM_001169701.2 → NP_001163172.1  uncharacterized protein Dmel_CG30460, isoform H [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001163172.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      C7LAA8, Q8MRK6
      Conserved Domains (1) summary
      pfam13913
      Location:66 → 87
      zf-C2HC_2; zinc-finger of a C2HC-type

    6. NM_206149.2 → NP_995871.1  uncharacterized protein Dmel_CG30460, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_995871.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A1ZAQ0
      Conserved Domains (1) summary
      pfam13913
      Location:66 → 87
      zf-C2HC_2; zinc-finger of a C2HC-type

    7. NM_206148.2 → NP_995870.1  uncharacterized protein Dmel_CG30460, isoform D [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_995870.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A1ZAQ1
      Conserved Domains (1) summary
      PHA03307
      Location:1112 → 1213
      PHA03307; transcriptional regulator ICP4; Provisional

    8. NM_206150.3 → NP_995872.1  uncharacterized protein Dmel_CG30460, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_995872.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8MRQ9
      Conserved Domains (1) summary
      pfam13913
      Location:66 → 87
      zf-C2HC_2; zinc-finger of a C2HC-type

    9. NM_001202033.2 → NP_001188962.1  uncharacterized protein Dmel_CG30460, isoform I [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001188962.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0B4JD34, C7LAA8
      Conserved Domains (1) summary
      COG5422
      Location:413 → 675
      ROM1; RhoGEF, Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases [Signal transduction mechanisms]
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    A0A0B4JD34 A0A0B4JD34
    A1ZAP8 A1ZAP8
    A1ZAQ0 A1ZAQ0
    A1ZAQ1 A1ZAQ1
    A8DYH3 A8DYH3
    B7YZI6 B7YZI6
    B7YZI7 B7YZI7
    Q6NQX3 Q6NQX3
    Q8MRK6 Q8MRK6
    Q8MRQ9 Q8MRQ9

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